Detail information of GWHGAAEX001226/evm.TU.scaffold_107.63


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672135538|ref|XP_008791438.1|4.44E-42PREDICTED: probable WRKY transcription factor 53 [Phoenix dactylifera]
Swissprottr|Q8H0Y8|WRK41_ARATH5.00E-33Probable WRKY transcription factor 41
trEMBLtr|M0S3Q5|M0S3Q5_MUSAM5.00E-37Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P27980_001}
TAIRAT4G110702.00E-32WRKY family transcription factor

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000010629404342941613-
Transcript Sequence

Network for GWHGAAEX001226

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module13

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03106.14WRKY891482.20E-24
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyWRKY

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms9.930
SRR2545915Juvenile tuber43.960
SRP108465SRR5643513five period of Gastrodia elata14.140
SRR5643514five period of Gastrodia elata10.350
SRR5643515five period of Gastrodia elata85.280
SRR5643524five period of Gastrodia elata5.960
SRR5643525five period of Gastrodia elata33.900
SRR5643528five period of Gastrodia elata7.850
SRR5643658five period of Gastrodia elata14.740
SRR5643659five period of Gastrodia elata110.560
SRR5643660five period of Gastrodia elata20.470
SRR5643661five period of Gastrodia elata67.760
SRR5643662five period of Gastrodia elata108.910
SRR5643663five period of Gastrodia elata65.270
SRR5643664five period of Gastrodia elata245.270
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_184.360
SRR6049655Rhizomagastrodiae_C368-T10_good_129.070
SRR6049656Rhizomagastrodiae_C368-T07_good_159.510
SRR6049657Rhizomagastrodiae_C368-T07_good_149.580
SRR6049658Rhizomagastrodiae_C368-T04_good_158.490
SRR6049659Rhizomagastrodiae_C368-T04_good_170.420
SRR6049660Rhizomagastrodiae_C368-T01_good_1121.320
SRR6049661Rhizomagastrodiae_C368-T04_good_177.090
SRR6049662Rhizomagastrodiae_C368-T01_good_129.510
SRR6049663Rhizomagastrodiae_C368-T01_good_1113.020
SRR6049664Rhizomagastrodiae_C368-T10_good_147.510
SRR6049665Rhizomagastrodiae_C368-T10_good_147.510
SRP279888GastroGastrodia elata tuber 24.99
JuvenJuvenile tuber3.04
Mother_GastroMother tuber of Gastrodia elata 61.85
Mother_JuvenMother tuber of Juvenile 9.88