Gene detail

Detail information of GWHGAAEX001237/evm.TU.scaffold_108.6

Functional Annotation

Database	Orthologs	E value	Annotation

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000117	274999	277761	+

Transcript Sequence
>GWHTAAEX001237 AGGTTTGTCCCTTCTTGTTCTGCTCTGTAAACAACAGAAAATAATGACGATGCCTTGTAGTATGAAAGAAGAATGAAAGCAAGTTTATCTCCTATTTCTCAACACGAGTGTCTTTGTTTGTGCATCGAATGCATGTATTTTTAAGAAAATAATATGATATATAGGGAAAGAAGAGAGAAATCAATATCAACTAATATCATGCAAAAGGGGTTGGACATCAATTTGATTTTGATATATCAATTTTGCCAGAATGAATAAAGCTGTAGTATGAGAGTTGCAACTAGTTTCAAACCAAACACAATTCAATTTCAGCTAAAAAGCCTCACCAGAAGGATTTGCTCAAATGAACATATTCTTAAGGGAATACAAGATATTGCACTTCATTACTTGATTTTTGGGCCATTTGGAGGGCATGAAGCGACTAAACATGACAGTAAACCCCTTTTTCAACTGATCTGTAGGTCGATAACTGGCTCAAGACTATCCTCATCTACAAAAGATACTTGTGGCGACTCAATATTTTCCATAAATCCCCAAGAGGTCAACTATTCTCTCTGGAAGACACTGGATACTGAGGAATTCAAACTTTATATTGCTGGTTCATATTTTGACGTCATCCAACAGATTCCAATGGTAAATAATATTTCAGCTTCACCTTGGAAATTCAAGCTCAACCTCCACTTCACTCTCCAATCCATGCCATATGCTAGCATAAAAAATTATGCATTGAAAAGTACTTCAGCAAGATAAAAAAGTTGATTTGATTCCCTGAATTTTTTAATGTTTTTTTCATCAAAGACTATCAACGTTTTCATATTTAGTCCACAGCTATTGAACCCAATTAAATCTCAAGAGAACAAAATTAGTTACCTATCAATGAAAATTATTTTGAGATTTTTTGGGAAGGGTTTTGCACGATTCGCATTTTGAATGATATGCTACAAATATTTTGCTTTATATCAATTGAATAAAATTTTTACTTTCAGTTTGTATATTATAATATTTGCATAAATTTTATTAAGATAATCAAAATTTTCCAGCATCGCTTTATAAAATAAAATATCTAATTCAAATCAATGTTTCTTTCAATTCACAGTTTTTGCTTTTGGAACTATTGGATAAAATATAAAAGAGATGACAAAATTGAAAACCTGAAATAAAAACTGAAACTTGCATAAAATCAGGGACGAAATCAACTCTTTATTCAAAACAATAACAAAGATGTAATTCCAGGAGCCCATTTGTGCTTACTATATATTTGTTAAGCTAATTGGGACAAATTAAAGTTCAAAAGTTCTAAATGTGCTTACGATAGATAAGGTGGCAGAAAAAGGATGACATTGTTTATTTAAATATTTAACAAACATCATGTGCCCACTAACTCACCAATCTTTCACTAGTACACCTACTATCCATTAGGCAATGCCATCCATCATTGATGTCACACACATAGTAAATAACAAAGCATTAAAATAGAAACAACAGCAGCTTCTTCAGCAACAGCTTTCTTTGTAGCAATGTCCAGCAACTTCTTTAGACAACAGCAACAGCCCCAAATGGAGCCAAAGTAGCTCATGTGACAAGTCATATTGATGCATATATCTATATTTGGCTGCTATAAATTGTTTTTACTGTCCAGCATGCTTTCTTTGGGAAAGCAATAACTTTTTGGTTGTGAATGGACTTGTTCATGGAAAATAATTTAATCATCTAAGCAATAGGCTAAACTTCAGTTCCAAGATGCTGGGTCACATCCAAAAGTAAGGCGCCATTAATAAAAGAAACAAGAATACCAAAACAGATAGAATCTCCCCCGAATCAATATATAACTACACCACTGTTTCATATAAAGCAACATCTTGATGATCACCATTAAAGCCATTACTTGTATCCATATGAAAATAAGTTCAACATTAGTTGACAGCCACTGAGAAAAAATCAAACATAGCTTAGCCTCAAAACTGGAAGAATGCAGCAAAGCAATCTATCACATAAAAAGATAAACTTGTGGCAAGCTATTGAGCTTTGTATTGATCAATCAAATAATTCGGATCAAAGTTTACAACGAAGATCAGCCAAAAGCAGCTAGCTTGACACCAAAAAATATGTCAGGTTGAGGAACATCTAATACATAATGACTGCATTGTAAATTATTTCACCTAGCTTTGAATTGTATCAAGACGCTCATGAATAATAATTCTATAACAGTTAAAAACAGAAATTTTGTTACTTGACAGGATACAAATTAAACCCAGCTTATATTTTTGCCATAAGTGTTAACAAACAACAAAGATAATATCAAACAACTTAGCATAGCATATCCAGGTTCAGCATTTGTCAGGCCAAGCAACTTCCTCAATAACACTACTGATTTGCTAAACCCTAATTTTCATCAAACAGTATAAAACTTTTTTCGCTATTTCACGGTGAACAGAGTAGTGCCAAGATTTATAAACATTGTTGTACCGATTCTCACGCATTATATAAAACACCACATACTACCTAAACATTTAGCACTTTATTCACATTCGGAACTGTACGCCAGTGTTCTTGTGGCAAAGGATTATGAAAAATAATGACAAATGACTAGGACACTGAGAAAAAGTAAAGTCCTCATAAGCATCGAAAGAGTTTTGTCTGCATACATGACAGAAGTGAGTCTCGAAGAAGCAGCTGAGTCATAATTTATTAGCAAAGCACCCTTTAGCAGTTCTCCTGAACCAATAACCGGTGAAGTTATCTTTCACAGAATTCAAAGAAAGA

Network for GWHGAAEX001237

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module8

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	4.510
SRP064423	SRR2545915	Juvenile tuber	3.460
SRP108465	SRR5643513	five period of Gastrodia elata	0.630
	SRR5643514	five period of Gastrodia elata	1.210
	SRR5643515	five period of Gastrodia elata	1.030
	SRR5643524	five period of Gastrodia elata	0.800
	SRR5643525	five period of Gastrodia elata	2.150
	SRR5643528	five period of Gastrodia elata	1.390
	SRR5643658	five period of Gastrodia elata	1.150
	SRR5643659	five period of Gastrodia elata	1.510
	SRR5643660	five period of Gastrodia elata	1.570
	SRR5643661	five period of Gastrodia elata	1.250
	SRR5643662	five period of Gastrodia elata	1.610
	SRR5643663	five period of Gastrodia elata	2.240
	SRR5643664	five period of Gastrodia elata	0.820
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	1.300
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	0.270
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	0.990
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	1.240
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.480
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.480
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	0.610
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	0.530
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	0.690
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	0.470
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	0.730
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	0.730
SRP279888	Gastro	Gastrodia elata tuber	1.72
	Juven	Juvenile tuber	1.64
	Mother_Gastro	Mother tuber of Gastrodia elata	0.85
	Mother_Juven	Mother tuber of Juvenile	0.96