Detail information of GWHGAAEX001262/evm.TU.scaffold_108.35_evm.TU.scaffold_108.36


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|300312848|ref|YP_003776940.1|1.00E-102NADPH:quinone oxidoreductase [Herbaspirillum seropedicae SmR1]
KOGKOG11971.00E-151Predicted quinone oxidoreductase
nrgi|672144463|ref|XP_008796131.1|7.38E-159PREDICTED: probable quinone oxidoreductase [Phoenix dactylifera]
trEMBLtr|B6VC74|B6VC74_GOSHI4.00E-156Ted2 {ECO:0000313|EMBL:ACJ11251.1}
TAIRAT5G615101.00E-151GroES-like zinc-binding alcohol dehydrogenase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011710030351005029+
Transcript Sequence

Network for GWHGAAEX001262

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00107.25ADH_zinc_N1672898.30E-28
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0016491Molecular Functionoxidoreductase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.690
SRR2545915Juvenile tuber1.660
SRP108465SRR5643513five period of Gastrodia elata6.720
SRR5643514five period of Gastrodia elata6.240
SRR5643515five period of Gastrodia elata6.400
SRR5643524five period of Gastrodia elata6.900
SRR5643525five period of Gastrodia elata5.130
SRR5643528five period of Gastrodia elata3.130
SRR5643658five period of Gastrodia elata3.260
SRR5643659five period of Gastrodia elata9.520
SRR5643660five period of Gastrodia elata9.530
SRR5643661five period of Gastrodia elata8.430
SRR5643662five period of Gastrodia elata10.920
SRR5643663five period of Gastrodia elata10.410
SRR5643664five period of Gastrodia elata9.580
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_17.640
SRR6049655Rhizomagastrodiae_C368-T10_good_14.320
SRR6049656Rhizomagastrodiae_C368-T07_good_17.400
SRR6049657Rhizomagastrodiae_C368-T07_good_15.480
SRR6049658Rhizomagastrodiae_C368-T04_good_12.390
SRR6049659Rhizomagastrodiae_C368-T04_good_13.110
SRR6049660Rhizomagastrodiae_C368-T01_good_13.120
SRR6049661Rhizomagastrodiae_C368-T04_good_13.840
SRR6049662Rhizomagastrodiae_C368-T01_good_16.860
SRR6049663Rhizomagastrodiae_C368-T01_good_15.920
SRR6049664Rhizomagastrodiae_C368-T10_good_16.600
SRR6049665Rhizomagastrodiae_C368-T10_good_16.600
SRP279888GastroGastrodia elata tuber 9.59
JuvenJuvenile tuber11.74
Mother_GastroMother tuber of Gastrodia elata 11.06
Mother_JuvenMother tuber of Juvenile 11.54