Detail information of GWHGAAEX001264/evm.TU.scaffold_108.38


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG00486.00E-59Transcription factor, Myb superfamily
nrgi|672175807|ref|XP_008807969.1|1.51E-71PREDICTED: transcription factor MYB48-like [Phoenix dactylifera]
Swissprottr|Q0JIC2|GAM1_ORYSJ4.00E-42Transcription factor GAMYB
trEMBLtr|A0A061G0B1|A0A061G0B1_THECC5.00E-66Myb-like HTH transcriptional regulator family protein, putative {ECO:0000313|EMBL:EOY22813.1}
TAIRAT3G604606.00E-59myb-like HTH transcriptional regulator family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011710514141053059-
Transcript Sequence

Network for GWHGAAEX001264

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00249.30Myb_DNA-binding25703.00E-12
PF00249.30Myb_DNA-binding811212.20E-12
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyMYB

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.070
SRR2545915Juvenile tuber0.070
SRP108465SRR5643513five period of Gastrodia elata0.410
SRR5643514five period of Gastrodia elata0.970
SRR5643515five period of Gastrodia elata0.570
SRR5643524five period of Gastrodia elata0.560
SRR5643525five period of Gastrodia elata0.400
SRR5643528five period of Gastrodia elata0.410
SRR5643658five period of Gastrodia elata0.050
SRR5643659five period of Gastrodia elata0.440
SRR5643660five period of Gastrodia elata0.360
SRR5643661five period of Gastrodia elata0.190
SRR5643662five period of Gastrodia elata0.550
SRR5643663five period of Gastrodia elata0.650
SRR5643664five period of Gastrodia elata0.790
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.590
SRR6049655Rhizomagastrodiae_C368-T10_good_10.200
SRR6049656Rhizomagastrodiae_C368-T07_good_10.490
SRR6049657Rhizomagastrodiae_C368-T07_good_10.130
SRR6049658Rhizomagastrodiae_C368-T04_good_10.350
SRR6049659Rhizomagastrodiae_C368-T04_good_10.200
SRR6049660Rhizomagastrodiae_C368-T01_good_10.350
SRR6049661Rhizomagastrodiae_C368-T04_good_10.250
SRR6049662Rhizomagastrodiae_C368-T01_good_11.340
SRR6049663Rhizomagastrodiae_C368-T01_good_10.730
SRR6049664Rhizomagastrodiae_C368-T10_good_10.230
SRR6049665Rhizomagastrodiae_C368-T10_good_10.230
SRP279888GastroGastrodia elata tuber 0.14
JuvenJuvenile tuber0.50
Mother_GastroMother tuber of Gastrodia elata 0.54
Mother_JuvenMother tuber of Juvenile 0.47