Gene detail

Detail information of GWHGAAEX001269/evm.TU.scaffold_108.43

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|337280900\|ref\|YP_004620372.1\|	1.00E-16	glycosyltransferase [Ramlibacter tataouinensis TTB310]
KOG	KOG1950	0	Glycosyl transferase, family 8 - glycogenin
nr	gi\|675275151\|gb\|AIL52751.1\|	0	putative glucuronosyltransferase PGSIP6-like protein [Dendrobium catenatum]
Swissprot	tr\|Q8GWB7\|GUX6_ARATH	0	Inositol phosphorylceramide glucuronosyltransferase 1 {ECO:0000303\|PubMed:25122154}
trEMBL	tr\|A0A077EWC5\|A0A077EWC5_9ASPA	0	Putative glucuronosyltransferase PGSIP6-like protein {ECO:0000313\|EMBL:AIL52751.1}
TAIR	AT5G18480_1	0	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000117	1310159	1327985	-

Transcript Sequence
>GWHTAAEX001269 TTACATTTCAATAAGATTAATTTACCCTCAATCTCAAATTTAGTTATGCCAAAATCATATATTCACTAATTTGGCATTTGCATCTGCGTGGGATATGCAGTATTTTGACTCATATTATTCCATCTGGAATGTAAATAATTACAGTTTAACCACGGCGGAGTCCCTCCGCGTCTTGCTCGACCGTTGACTAGAGGCTCGTTGCCGTTCGCTCAATTCGTCAAAGATACAGAGCCGTTCGTCGATTGCTGTCCCGCCTTCTCGGAGAGAAATATGTTGTTCTTTCTTTTTGTTTGGATGATTGAAAGTCTCTCGATTTAGGTTTTTGGAAGGCAGCACGGTGTCAATAAGAGGTTTCCTGTTCTGCGGAGCTCAAGATTCTCGGTGAAAATGAGCTGGTATCGCGCTTTTGTAGTGGTCGTATTTGCGTTGGCATGTGTGCTCGGGAGATCCGCAAGAGCCGAGGAGGCTTATGTGACTCTTCTATATGGGGACGAGTTCGTTTTAGGAGTTAGGGTTCTGGGGAAGTCGATTCGTGATACCGGATCGACCAAGGACATGGTGGTTCTGGTATCGGACGGTGTTTCTGATTATGCTAAAAAGCTGCTTCAGGCTGATGGTTGGAAGGTGGAACTTATTAGCCTGCTGTCAAATCCAAATCAAGTGAGGCCAAAAAGATTCTGGGGAGTTTACACCAAATTGAAAATTTTTAACATGACCACATACAGCAAAGTTGTTTATCTTGATGCGGATACAATTGTTGTCAAAAGTATAGAGGATCTTTTTCAGTGTAGCAAATTTTGTGCCAACTTGAAGCATTCTGAGAGATTGAATTCTGGAGTCATGGTTGTTGAACCTTCAGATTCTCTTTTTAAAGATATGATGAGCAAAGTGAATTCATTACCTTCTTATACTGGAGGTGATCAGGGCTTTCTTAATTCTTACTATGGTGATTTTGCTAGTGCTCAACTATTTGAGCCAAACCTTCCTGCTGATGTGAGGAAGAATAAGCCTGTTCCTGAGGTGGAGAGATTGTCTACTCTGTATAATGCTGATGTTGGACTGTATATGCTTGCCAATAAGTGGATGGTTGATGAAAGAGAACTTAGAGTTATCCACTACACACTCGGACCAATTAAACCATGGGACTGGTGGGCTGCATGGCTTGTGAAGCCCGTGGAAGTTTGGCAGAATGTTAGGTTGCAGCTGAAAGAATCACTTCCTGGAACTGCAGGAGGAACCAACCCTAGTGAGAGTGCGTTGATCAAGTTTTTGTTCACATTTCCCCTGATAGTTCTGTTGGTTGTCTATTATAGATCATGCGCTCAGGTGAAAGAGGTCTTCTGGAACAAATTTTGCTGGAGTTCTATTTGTGACTATGTTAGACGTTTCTTTTATAATTTCAGAACAGGAGGGTTTTGTACTTATTCTGCTGTTGGTGTTACTACTTCATCTACTGGCAATCATAATCAGCAGTTCTTATATGGTATAAATTCAAAGGTTCCTACTTATTTGGGTCCGGCATCAATATTATTTTGCTTTACAGCGGCCCTGTTGTCTCTTGCACTTGCGTTTGTTATTATACCTCGACAAGTAAGTCCATGGACTGGTTTGCTGTTGATGTACGAGTGGGCAATTGTGACATTTTTAATGGTGTTTGGGAGTTACCTTCGCCTACTCTACAACTGGGGCAAGCTAGCAAGTCATGCAGGAAGGGTATTTAATCAACTGAGTTCTTCTAATTATGATTCAGGCAAAGGTCATCAACGTCAGTCATCTAACTGGGATGCTCTCACATGCTGCTATGGCACTGGAATGGCCTTTCTAGCTGTTATTGTCCCCTCAATCCCATGCCTGTTTGGTGTCACTGCACTTTTTGCTAGGATGGGCTTGATTGTAGGGGGAGGCATAGTGCTGGCAATTTTCATGACCTATGCTTCAGAGCAGCTTGCTCTCAATGCTTTCCTAAAAGGGATGGAAGACCGCGATCTCCCAAAAGCTACCAAAGCCATATGCTTCTTGTGTTGATTCGACCTCTTCTTCTTGTGTTGATTCGACCTCTTATTTATAGGGATATTTGCCCACCTAACACTCAAAATTTTAATATTTTGCATATCCGGCGCTTAAACTTTAATATTTACAACAAACGCACTTCCATCTCATTTCTGATGTGTTATATCATGAAGCCTCATTTGTAAATATGCTGAAAGTTCGGGCACCGGATATGTAAATTATAAAAATTCAGGTGCTATATATGCAAAGGCCCCTTATTTATTTATACCTTGTACATTAGTTCTTTATCGCTAGTTCTTGAGTGCATGATGAATAATAGTTGCTTTAGAATAGGATTACACTTTTTTAGAGACTTTAGTTTTATTCATATTTGTTATTTAGACCCTGAAACTTAGGGGTCACCCATATAGCTAGTTCGCCATAGAATTGTTCAGAAACTGCAATTTATGCTTATTATTGTAAATTTATAGACCCTGAATAGTTGAATGCTCATTCAGCCACTAATAATTTTATAAAATTCTGC

Network for GWHGAAEX001269

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01501.19	Glyco_transf_8	87	133	3.40E-06

Protein Sequence

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT8

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0016757	Molecular Function	transferase activity, transferring glycosyl groups

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	34.430
SRP064423	SRR2545915	Juvenile tuber	32.160
SRP108465	SRR5643513	five period of Gastrodia elata	35.090
	SRR5643514	five period of Gastrodia elata	29.190
	SRR5643515	five period of Gastrodia elata	38.520
	SRR5643524	five period of Gastrodia elata	35.220
	SRR5643525	five period of Gastrodia elata	50.800
	SRR5643528	five period of Gastrodia elata	73.210
	SRR5643658	five period of Gastrodia elata	49.700
	SRR5643659	five period of Gastrodia elata	28.830
	SRR5643660	five period of Gastrodia elata	24.690
	SRR5643661	five period of Gastrodia elata	29.940
	SRR5643662	five period of Gastrodia elata	28.820
	SRR5643663	five period of Gastrodia elata	26.430
	SRR5643664	five period of Gastrodia elata	24.020
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	28.080
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	30.110
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	28.120
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	29.470
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	32.890
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	34.810
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	32.770
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	34.440
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	28.660
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	29.700
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	31.750
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	31.750
SRP279888	Gastro	Gastrodia elata tuber	26.94
	Juven	Juvenile tuber	28.76
	Mother_Gastro	Mother tuber of Gastrodia elata	71.31
	Mother_Juven	Mother tuber of Juvenile	64.98