Detail information of GWHGAAEX001274/evm.TU.scaffold_108.48


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG28093.00E-97Telomerase elongation inhibitor/RNA maturation protein PINX1
nrgi|695021911|ref|XP_009398060.1|4.28E-139PREDICTED: G patch domain-containing protein 4 [Musa acuminata subsp. malaccensis]
trEMBLtr|M0SRV5|M0SRV5_MUSAM3.00E-132Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P24940_001}
TAIRAT1G639803.00E-97D111/G-patch domain-containing protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011715594981583645+
Transcript Sequence

Network for GWHGAAEX001274

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01585.22G-patch17584.50E-15
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003676Molecular Functionnucleic acid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms52.080
SRR2545915Juvenile tuber65.080
SRP108465SRR5643513five period of Gastrodia elata57.590
SRR5643514five period of Gastrodia elata60.860
SRR5643515five period of Gastrodia elata48.260
SRR5643524five period of Gastrodia elata53.610
SRR5643525five period of Gastrodia elata42.540
SRR5643528five period of Gastrodia elata34.490
SRR5643658five period of Gastrodia elata50.540
SRR5643659five period of Gastrodia elata67.300
SRR5643660five period of Gastrodia elata66.650
SRR5643661five period of Gastrodia elata96.030
SRR5643662five period of Gastrodia elata64.530
SRR5643663five period of Gastrodia elata71.630
SRR5643664five period of Gastrodia elata66.340
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_157.010
SRR6049655Rhizomagastrodiae_C368-T10_good_158.570
SRR6049656Rhizomagastrodiae_C368-T07_good_156.900
SRR6049657Rhizomagastrodiae_C368-T07_good_149.520
SRR6049658Rhizomagastrodiae_C368-T04_good_155.010
SRR6049659Rhizomagastrodiae_C368-T04_good_145.750
SRR6049660Rhizomagastrodiae_C368-T01_good_153.140
SRR6049661Rhizomagastrodiae_C368-T04_good_150.110
SRR6049662Rhizomagastrodiae_C368-T01_good_155.350
SRR6049663Rhizomagastrodiae_C368-T01_good_152.140
SRR6049664Rhizomagastrodiae_C368-T10_good_156.230
SRR6049665Rhizomagastrodiae_C368-T10_good_156.230
SRP279888GastroGastrodia elata tuber 83.55
JuvenJuvenile tuber73.02
Mother_GastroMother tuber of Gastrodia elata 50.21
Mother_JuvenMother tuber of Juvenile 48.06