Detail information of GWHGAAEX001275/evm.TU.scaffold_108.49
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|336177049|ref|YP_004582424.1| | 2.00E-23 | serine/threonine protein kinase [Frankia symbiont of Datisca glomerata] |
| KOG | KOG0660 | 0 | Mitogen-activated protein kinase |
| nr | gi|469826691|gb|AGH89467.1| | 0 | mitogen-activated protein kinase 1 [Dendrobium catenatum] |
| Swissprot | tr|Q5J4W4|MPK2_ORYSJ | 0 | Mitogen-activated protein kinase 2 |
| trEMBL | tr|M4URD5|M4URD5_9ASPA | 0 | Mitogen-activated protein kinase {ECO:0000256|RuleBase:RU361165} |
| TAIR | AT4G01370 | 0 | MAP kinase 4 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000117 | 1592154 | 1636035 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX001275
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module7 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 43 | 325 | 1.40E-68 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | CMGC_MAPK |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K20600 | MPK4 | MAPK signaling pathway - plant | map04016 |
| Plant-pathogen interaction | map04626 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004707 | Molecular Function | MAP kinase activity |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 13.160 |
| SRR2545915 | Juvenile tuber | 15.840 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 15.560 |
| SRR5643514 | five period of Gastrodia elata | 15.500 | |
| SRR5643515 | five period of Gastrodia elata | 16.930 | |
| SRR5643524 | five period of Gastrodia elata | 13.360 | |
| SRR5643525 | five period of Gastrodia elata | 18.640 | |
| SRR5643528 | five period of Gastrodia elata | 10.650 | |
| SRR5643658 | five period of Gastrodia elata | 14.970 | |
| SRR5643659 | five period of Gastrodia elata | 40.030 | |
| SRR5643660 | five period of Gastrodia elata | 34.350 | |
| SRR5643661 | five period of Gastrodia elata | 39.570 | |
| SRR5643662 | five period of Gastrodia elata | 27.770 | |
| SRR5643663 | five period of Gastrodia elata | 65.280 | |
| SRR5643664 | five period of Gastrodia elata | 39.210 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 11.070 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 15.160 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 9.190 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 10.840 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 7.740 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 8.880 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 10.090 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 8.460 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 8.790 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 8.370 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 9.690 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 9.690 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 33.84 |
| Juven | Juvenile tuber | 58.59 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 7.35 | |
| Mother_Juven | Mother tuber of Juvenile | 27.35 |