Gene detail

Detail information of GWHGAAEX001278/evm.TU.scaffold_108.52

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|479128861\|ref\|YP_005068821.1\|	4.00E-15	putative esterase [Arthrospira platensis NIES-39]
nr	gi\|743845964\|ref\|XP_010938710.1\|	0	PREDICTED: GDSL esterase/lipase At2g23540 [Elaeis guineensis]
Swissprot	tr\|O80470\|GDL38_ARATH	2.00E-180	GDSL esterase/lipase At2g23540 (Precursor)
trEMBL	tr\|K3ZUF2\|K3ZUF2_SETIT	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:Si030233m}
TAIR	AT2G23540	6.00E-180	GDSL-like Lipase/Acylhydrolase superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000117	1671228	1675041	+

Transcript Sequence
>GWHTAAEX001278 GAAACACTTAAGTTCACGCGAACAGAGCAATAAAATTTTCTTTATATCAAAAGAAATAATTACAAGAAAAATTCAAGAGCTTAAGCACACCCTTAAGAATAAACACAAACATTTTATTTATAATGGTTTCATCCCTCAACCAATAAGCTTTAATTTTCATTGGTTTCAGATATTGTGTTGCAGATACTAGCCAACTCTGTGCCTCACTCTTCTCGGATATTGGCAGTGTTGGGATGTGATATATATATATAGAAAGATAGATAGATATATATGTGTGTCCTCGTTCTTCTTTATTGCTCTAATTAGTCGTAATGATAATATAATAATACATAACAATAATTCGTGCCAATCTCCAATGCAACAATGGGTCAAACAATAGTTGTGAGGGGCGTTTAAGTGTTGATAAACCACCACAACACAAGGAAACCAAACAGAGATCTTGCTTCCAACCCACGGCTTATAAATATATACTAAGAATTCAACAACCCAATATAAAAGAAGCCTGGAATCATCACAAGGCTGATGCTACATGGCTATGCAGGCAATCATGCTAATGCTCTCCCTCGCCGGAGTTGCCTCCACCGCCGTCGATGAAATAACCGCTTCCTTCGTGTTTGGGGACTCTCTCGTCGACGCCGGAAACAACAACTATCTGCCCACACTGTCGAAGGCCAACATAGTGCCCAACGGAATCGATTTCAAGGCCTCAGGCGGGATGCCGACGGGTCGGTTCACCAACGGGAGGACGATTGCAGATCTTGTTGGAGAGAGTTTGGGACAGAATGGTTACTCGCAGCCATTTCTGGCTCCGAACACGACGGGAAGCGTTATACTGAATGGGGTAAATTACGCGTCCGGCGGAGGAGGAATACTGAACAGCACCGGACAGATATTCGTGAACAGACTGGGGCTGGACATACAGATAGACTACTTCAACATAACGAGGCAGGAAATAGACCGACAGTTGGGGAAATCTCAGGCCAAGTCATTTCTGATGAAGAATGCGATCTTCTCGCTGACGATAGGATCCAACGATTTCCTCAACAACTATCTCTTTCCCTTACTCTCCGCGGGCGAGAGAATCAACCAATCTCCCGACGGCTTCGTTGATCTCCTCATCAGCTCCCTCAGATCCCAACTCACTAGATTATACACATTGGATGCTCGAAAGTTCGTGGTTGCGAACGTGGGTCCGATCGGCTGCATCCCGTATCAGAGGAGCATCAACAGGTTGACGGAGGCGGAGTGCGTGAGCCTGCCGAATGAGCTCGCAAGGCAATACGACGGCCAATTGAGGGGCTTGCTCACTGAACTCAACCAAAATCTCCCCGGAGCCAAATTCTGCCTCGCCAATGTCTACGATCTCGTTCTCGAAATCATCACCAACTATCCGAAATACGGGTTTAAAACATCGACCACGGCGTGCTGCGGAAACGGCGGGAGGTTTGCCGGAATCGTTCCCTGCGGGCCGACGTCGACTCTGTGCGACAATCGATCTGAGCATGTGTTTTGGGATCCTTACCATCCCAGCGAAGCGGCTAATTTGATCATATCCAAGCATATCGTTGATGGAGACACCAAGTACATATCTCCGATGAATCTTAGGCAGCTCAGAAATCTCTGACCGCTCCCAATTTCTTGTGATGCATTATAGAGCAGCAGATTGATTCCTCTCTAACCAGGACTCAGAAGATGGATGTAATTCTTTTATTGTCTCATGTAAAGAAGATCTTATGCTATTAAATTAAATTCTTAACCATTCATGAATCACATGTGATGTTGCACATAGTATGTTCGTATATTTCAATCCAAATCCATGTAAAATATGAAGCAAAAATGATCATTCATACTCGAGTCATAAATAAACAAACATGTGTAGCCTAAGCTTTAGAGTTTACAGAAGAGAGGAAAGATGCATAAGTAAGAAATGTGTGTCTGGAAGGAGAGCAAGGGATTGGCCTAAGAATGGTAGGAAGAGTCGAAGAAGAGATGGTCAGAAAGCAGAGAGGAAGGGTGGGAAGGAAAGTGAAGAAGGGTGGCGCGGCAGAGAGGGCAGGTTGGACAGCCGTGCAGCAGCCACGCGTCGAGGCAGCGGCTGTGGAAAACGTGGCGGCAGCAACGGAGGCGGCGGACTTCGTCGGAGATCTGGAAGTCGCAGAGGCAAACAGAGCAGCCGTCCGGCAGCCTCCCTTCGGCGTCCTGGATAAGAAGCTGGCCGAAGCTGAGCGCGGACGGCAGATTCTGCCCAATGAGCGTTGCTGAGGAAGAGAGGATGTCGGAGTGGAAGGAGGAGTCTAGGAGGAGATCGCCGAGGCCGAGGGCGCAGAAAGCGGAGGAGAGGAGGCTCCGCAAGATGGCAAGGAAAGAGAGAACATGCAGGATGAGCTTCGGAAGGAGGAGCTCCGAGTAAGGGGTGGGGAACCCCATTGTTATGATCTGATACGACCTTGAAGAAGGGCCGACCGAGCCAGAGAGGAAGGAGATGATGCTCTTTTTCCTTTT

Network for GWHGAAEX001278

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module13

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00657.21	Lipase_GDSL	27	345	1.10E-13

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0016788	Molecular Function	hydrolase activity, acting on ester bonds

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	16.770
SRP064423	SRR2545915	Juvenile tuber	20.490
SRP108465	SRR5643513	five period of Gastrodia elata	17.400
	SRR5643514	five period of Gastrodia elata	20.490
	SRR5643515	five period of Gastrodia elata	53.030
	SRR5643524	five period of Gastrodia elata	14.790
	SRR5643525	five period of Gastrodia elata	8.360
	SRR5643528	five period of Gastrodia elata	22.730
	SRR5643658	five period of Gastrodia elata	10.140
	SRR5643659	five period of Gastrodia elata	62.550
	SRR5643660	five period of Gastrodia elata	24.830
	SRR5643661	five period of Gastrodia elata	30.220
	SRR5643662	five period of Gastrodia elata	36.600
	SRR5643663	five period of Gastrodia elata	30.860
	SRR5643664	five period of Gastrodia elata	47.370
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	31.140
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	45.960
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	30.410
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	22.400
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	21.040
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	25.050
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	40.650
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	29.380
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	27.960
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	36.930
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	21.490
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	21.490
SRP279888	Gastro	Gastrodia elata tuber	13.01
	Juven	Juvenile tuber	5.05
	Mother_Gastro	Mother tuber of Gastrodia elata	33.95
	Mother_Juven	Mother tuber of Juvenile	20.07