Detail information of GWHGAAEX001301/evm.TU.scaffold_108.78


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672187468|ref|XP_008813341.1|4.25E-33PREDICTED: UPF0426 protein At1g28150, chloroplastic [Phoenix dactylifera]
Swissprottr|Q9FZ89|Y1815_ARATH2.00E-23UPF0426 protein At1g28150, chloroplastic (Precursor)
trEMBLtr|J3LZS4|J3LZS4_ORYBR5.00E-25Uncharacterized protein {ECO:0000313|EnsemblPlants:OB04G26490.1}
TAIRAT1G281506.00E-23Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011721849232186973+
Transcript Sequence

Network for GWHGAAEX001301

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms24.380
SRR2545915Juvenile tuber35.700
SRP108465SRR5643513five period of Gastrodia elata30.840
SRR5643514five period of Gastrodia elata39.890
SRR5643515five period of Gastrodia elata34.370
SRR5643524five period of Gastrodia elata33.840
SRR5643525five period of Gastrodia elata33.880
SRR5643528five period of Gastrodia elata29.050
SRR5643658five period of Gastrodia elata37.760
SRR5643659five period of Gastrodia elata25.310
SRR5643660five period of Gastrodia elata22.330
SRR5643661five period of Gastrodia elata25.350
SRR5643662five period of Gastrodia elata22.990
SRR5643663five period of Gastrodia elata29.830
SRR5643664five period of Gastrodia elata22.420
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_127.250
SRR6049655Rhizomagastrodiae_C368-T10_good_118.490
SRR6049656Rhizomagastrodiae_C368-T07_good_128.540
SRR6049657Rhizomagastrodiae_C368-T07_good_123.350
SRR6049658Rhizomagastrodiae_C368-T04_good_122.310
SRR6049659Rhizomagastrodiae_C368-T04_good_119.980
SRR6049660Rhizomagastrodiae_C368-T01_good_129.190
SRR6049661Rhizomagastrodiae_C368-T04_good_124.500
SRR6049662Rhizomagastrodiae_C368-T01_good_128.320
SRR6049663Rhizomagastrodiae_C368-T01_good_125.440
SRR6049664Rhizomagastrodiae_C368-T10_good_132.800
SRR6049665Rhizomagastrodiae_C368-T10_good_132.800
SRP279888GastroGastrodia elata tuber 47.02
JuvenJuvenile tuber41.22
Mother_GastroMother tuber of Gastrodia elata 37.49
Mother_JuvenMother tuber of Juvenile 33.85