Detail information of GWHGAAEX001307/evm.TU.scaffold_108.84
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|32471474|ref|NP_864467.1| | 4.00E-21 | serine/threonine-protein kinase pknA [Rhodopirellula baltica SH 1] |
| nr | gi|743779311|ref|XP_010920120.1| | 0 | PREDICTED: probable receptor-like protein kinase At5g56460 isoform X2 [Elaeis guineensis] |
| Swissprot | tr|Q8RWW0|ALE2_ARATH | 7.00E-71 | Receptor-like serine/threonine-protein kinase ALE2 (Precursor) |
| trEMBL | tr|M0SS34|M0SS34_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P25730_001} |
| TAIR | AT1G77280 | 6.00E-141 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000117 | 2290928 | 2295122 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX001307
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module1 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00582.25 | Usp | 11 | 134 | 8.50E-06 |
| PF00069.24 | Pkinase | 308 | 574 | 6.30E-43 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_RLCK-VI |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 5.530 |
| SRR2545915 | Juvenile tuber | 9.750 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 7.330 |
| SRR5643514 | five period of Gastrodia elata | 10.660 | |
| SRR5643515 | five period of Gastrodia elata | 11.120 | |
| SRR5643524 | five period of Gastrodia elata | 10.620 | |
| SRR5643525 | five period of Gastrodia elata | 23.400 | |
| SRR5643528 | five period of Gastrodia elata | 15.640 | |
| SRR5643658 | five period of Gastrodia elata | 30.030 | |
| SRR5643659 | five period of Gastrodia elata | 5.600 | |
| SRR5643660 | five period of Gastrodia elata | 4.380 | |
| SRR5643661 | five period of Gastrodia elata | 3.390 | |
| SRR5643662 | five period of Gastrodia elata | 3.530 | |
| SRR5643663 | five period of Gastrodia elata | 4.500 | |
| SRR5643664 | five period of Gastrodia elata | 2.480 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 6.340 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 4.220 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 6.340 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 5.850 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 2.980 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 3.520 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 5.380 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 5.270 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 4.720 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 3.600 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 4.670 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 4.670 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 5.89 |
| Juven | Juvenile tuber | 8.74 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 9.46 | |
| Mother_Juven | Mother tuber of Juvenile | 7.81 |