Detail information of GWHGAAEX001318/evm.TU.scaffold_108.98


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|189502744|ref|YP_001958461.1|6.00E-36hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
KOGKOG01920Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs
nrgi|672116148|ref|XP_008781230.1|0PREDICTED: serine/threonine-protein kinase HT1-like isoform X1 [Phoenix dactylifera]
Swissprottr|Q2MHE4|HT1_ARATH3.00E-72Serine/threonine-protein kinase HT1
trEMBLtr|W1NLD1|W1NLD1_AMBTC0Uncharacterized protein {ECO:0000313|EMBL:ERM96281.1}
TAIRAT4G357800ACT-like protein tyrosine kinase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011725757322627247+
Transcript Sequence

Network for GWHGAAEX001318

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01842.24ACT1652276.80E-07
PF07714.16Pkinase_Tyr2775263.90E-70
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyTKL-Pl-4

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms26.850
SRR2545915Juvenile tuber15.650
SRP108465SRR5643513five period of Gastrodia elata11.190
SRR5643514five period of Gastrodia elata1.730
SRR5643515five period of Gastrodia elata5.710
SRR5643524five period of Gastrodia elata2.080
SRR5643525five period of Gastrodia elata19.020
SRR5643528five period of Gastrodia elata20.000
SRR5643658five period of Gastrodia elata36.640
SRR5643659five period of Gastrodia elata3.430
SRR5643660five period of Gastrodia elata1.160
SRR5643661five period of Gastrodia elata0.700
SRR5643662five period of Gastrodia elata0.390
SRR5643663five period of Gastrodia elata0.760
SRR5643664five period of Gastrodia elata1.080
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_115.570
SRR6049655Rhizomagastrodiae_C368-T10_good_15.180
SRR6049656Rhizomagastrodiae_C368-T07_good_17.920
SRR6049657Rhizomagastrodiae_C368-T07_good_125.710
SRR6049658Rhizomagastrodiae_C368-T04_good_124.570
SRR6049659Rhizomagastrodiae_C368-T04_good_135.870
SRR6049660Rhizomagastrodiae_C368-T01_good_111.110
SRR6049661Rhizomagastrodiae_C368-T04_good_123.890
SRR6049662Rhizomagastrodiae_C368-T01_good_15.820
SRR6049663Rhizomagastrodiae_C368-T01_good_16.660
SRR6049664Rhizomagastrodiae_C368-T10_good_15.540
SRR6049665Rhizomagastrodiae_C368-T10_good_15.540
SRP279888GastroGastrodia elata tuber 2.07
JuvenJuvenile tuber4.88
Mother_GastroMother tuber of Gastrodia elata 83.18
Mother_JuvenMother tuber of Juvenile 29.47