Gene detail

Detail information of GWHGAAEX001320/evm.TU.scaffold_108.100

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|300722493\|ref\|YP_003711783.1\|	3.00E-19	glutathione S-transferase [Xenorhabdus nematophila ATCC 19061]
KOG	KOG0867	3.00E-42	Glutathione S-transferase
nr	gi\|695021043\|ref\|XP_009397596.1\|	4.97E-83	PREDICTED: glutathione S-transferase F10-like [Musa acuminata subsp. malaccensis]
Swissprot	tr\|Q9FE46\|GSTFC_ARATH	8.00E-43	Glutathione S-transferase F12
trEMBL	tr\|M0RWD4\|M0RWD4_MUSAM	2.00E-81	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr1P02260_001}
TAIR	AT5G17220	3.00E-42	glutathione S-transferase phi 12

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000117	2630567	2631682	+

Transcript Sequence
>GWHTAAEX001320 ATGGCGAGCGTCAGGATTTTTGGATCGCCGGCGAGCACTGAGGTTCAGAGGGTTCTCACTTGTCTTTTTGAGAAACAGGTCGAATTCCAGCTCGTGAAGATGGATAACTTCAGGGGATCCAAGAGGCTGCCCGAGTGCCTCAAGATGCAGCCTGGAGGCGAAGCTCTCGCTTATCAGGACGAGAAGGATGCCCTCGTTGAGTCACGTGCGATATGCCGGCACGTGGTAGACAATTGCAAGACGCAAGGGAACCGGGAGCTGATGGGGGAGGGGTCTCTGGAGCGTGCCCTAATCGAACAATGGCTGGAGACGGAGGCGCACAAATTCGACCCTCCGAGCTCGGATCTCGTCTTCTACCTCTCGATCTCTCCCACTCTACCCGATCAGGAGCGCGTTGACCCCTCCATCTTGGATGAGAGCAAGCGGAAGCTCGAGAAGGTGCTCAAAGTCTACGACCAGAGGCTCTCAGACAACGCCTACCTCACCGGAAACAAATTCACCCTCGCCGACCTCTCCCACCTCCCCAACGCCGAGCTCCTCATGAGGATCGAAGAGACACGGGAGATGTTCCGCAGGCACCGCAATGTCGACCGCTGGTGGATGGACATTTCCAAGCGCATCTCGTGGCAAAAGGTACTCGAGATCGCCAACCAGGCGCCCCCCATGGCTTGA

Network for GWHGAAEX001320

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module1

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF02798.19	GST_N	4	76	5.20E-06
PF00043.24	GST_C	133	205	2.90E-11

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K00799	GST, gst	Metabolic pathways	map01100
		Glutathione metabolism	map00480
		Metabolism of xenobiotics by cytochrome P450	map00980
		Drug metabolism - cytochrome P450	map00982
		Drug metabolism - other enzymes	map00983
		Longevity regulating pathway - worm	map04212

Gene Ontology

GO term	Ontology	Name
GO:0005515	Molecular Function	protein binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	237.090
SRP064423	SRR2545915	Juvenile tuber	172.560
SRP108465	SRR5643513	five period of Gastrodia elata	133.960
	SRR5643514	five period of Gastrodia elata	156.390
	SRR5643515	five period of Gastrodia elata	144.670
	SRR5643524	five period of Gastrodia elata	127.960
	SRR5643525	five period of Gastrodia elata	548.350
	SRR5643528	five period of Gastrodia elata	271.550
	SRR5643658	five period of Gastrodia elata	302.270
	SRR5643659	five period of Gastrodia elata	124.410
	SRR5643660	five period of Gastrodia elata	152.250
	SRR5643661	five period of Gastrodia elata	148.090
	SRR5643662	five period of Gastrodia elata	174.400
	SRR5643663	five period of Gastrodia elata	178.210
	SRR5643664	five period of Gastrodia elata	270.450
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	258.810
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	429.170
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	241.650
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	227.450
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	223.190
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	197.470
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	197.940
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	222.120
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	226.740
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	156.710
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	179.740
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	179.740
SRP279888	Gastro	Gastrodia elata tuber	430.09
	Juven	Juvenile tuber	105.92
	Mother_Gastro	Mother tuber of Gastrodia elata	87.25
	Mother_Juven	Mother tuber of Juvenile	47.46