Gene detail

Database	Orthologs	E value	Annotation
KOG	KOG2744	2.00E-60	DNA-binding proteins Bright/BRCAA1/RBP1 and related proteins containing BRIGHT domain
nr	gi\|695009119\|ref\|XP_009391177.1\|	1.52E-104	PREDICTED: high mobility group B protein 9-like [Musa acuminata subsp. malaccensis]
Swissprot	tr\|Q9SGS2\|HMGB9_ARATH	1.00E-89	High mobility group B protein 9
trEMBL	tr\|M0SAM5\|M0SAM5_MUSAM	6.00E-105	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr3P00570_001}
TAIR	AT1G76110_1	2.00E-60	Unannotated protein

Scaffold	Start	End	Strand
GWHAAEX00000117	2632411	2638866	-

Transcript Sequence
>GWHTAAEX001321 ATGATTCCGAAGCTTCCAAGGCGAAATAAAAGAGCTTTCTTTGAAGAAGAAGAAGGAAGAAGAGAAGCAGAAAGCAGCAGCAAAGGGAAGCCGCAGATGAAGGATTACCCTCCGCCATTGTCCACTCACAGCGAGCTCTGCACCAACCCCGGAGTCTTCGCCGAGACCTTGCGTCGCTTCCATTCTCTCATGGGAACAAAATTCATGATACCGGTGATAGGAGGGAAGGATCTGAATCTGCATCTGCTGTATGTTGAGGTGACCAAAAGAGGGGGGCTCGAGAAGGTGATAATGGAGAAGAGGTGGAGGGAGGTGATATCGATTTTTAACTTTCCACCGACGACGACGAGCGCTTCCTTTGTGCTGAGAAAGTACTATTTGAGTCTGCTGCATCATTTTGAGCAGCTTTATTTTTTTGGGGCGCGAGGGGCGCTCCTCCCGCCCTCTGGTGGGCCTCATAGTAGTCATAATATATATGCTGCTGCTCTTTTTTTTCTGTCAATTTTTTATATGTTGGGGCATTGCAGAGGCGCTGCAAGCCAGGAGCAGCCAGTCGGATATGGTGGCAGTCCTTGTAATTTCACGGTAACGGGGACGATTGACGGCAAGTTTGATTATGGCTACTTAGTTACTGTAAAGATTGGCTCTCAGCTGCTTCATGGAGTGCTTTATCACATCCACCAGCCTCAAATAGGAAGCCCTTCTCCATCTATGTATATTAGTAATAATAATCAGCAGCAGCCGGCTTCTTCAACCATAAACTTAAACGTCCCTGAAAGAAGGTCTGTTGGGAGGAAATCGCGGCTTAAGAATCCACGAGACCCAGCCCGGCCGAAGCACAACCGGAGTGCATACAACTTCTTCTTTGCAGAGAAGCATTCTGAGCTCAAAGCTCAGGGCCCGCACTTTGAGGGAGTGTACAGCAAGAGAATAGGAGAGTCCTGGAATAAGCTCACTGATGAAGAGAGGCAGCTCTATGAAGACTATGCAAGGAGAGATAAAGAAAGATACAGAATAGAGTTGCAGGCTTACAAGGAAAGGTTGAAGTTTTTCGAGCCAAAACAATCTCAGCAATTTGCGAGAATAACAGGTATTGGGAGAAGAGTAATGATGGAGAGCTTTCAGAAAGCTAATCACCCAAAGGAGGAATCATGTCATTCAGCCGGGGATGCTGAGCAGCCGGGACAAGAAGTTCCCAGAAAAAAGATGCAGGATTTTGTTGAAAGAGACAACAAGCTTGTTCTTCCAGAAGAGTCCGGGAGTTCTGCGATAGGGGGTGCTAGAATTGATGATTCAGATCATTCTGCAATGGAAGCCGATGTGCTGAATTCTGCAGATTCAACAGATTTGAGGGAGGCGAATCTTGCAGACTAG

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Module ID	Function Annotation
Module4

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01388.20	ARID	53	134	2.20E-18
PF00505.18	HMG_box	278	345	3.00E-13

Protein Sequence

Gene family	subfamily
Transcription Factors Family	ARID

KO	Enzyme	pathway	mapID
--	--	--	--

GO term	Ontology	Name
GO:0003677	Molecular Function	DNA binding

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.350
SRP064423	SRR2545915	Juvenile tuber	0.260
SRP108465	SRR5643513	five period of Gastrodia elata	0.550
	SRR5643514	five period of Gastrodia elata	0.860
	SRR5643515	five period of Gastrodia elata	0.910
	SRR5643524	five period of Gastrodia elata	0.810
	SRR5643525	five period of Gastrodia elata	1.000
	SRR5643528	five period of Gastrodia elata	1.470
	SRR5643658	five period of Gastrodia elata	1.660
	SRR5643659	five period of Gastrodia elata	0.500
	SRR5643660	five period of Gastrodia elata	0.490
	SRR5643661	five period of Gastrodia elata	0.390
	SRR5643662	five period of Gastrodia elata	1.570
	SRR5643663	five period of Gastrodia elata	0.790
	SRR5643664	five period of Gastrodia elata	1.010
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	0.160
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	0.730
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	1.000
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	1.000
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.310
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.910
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	1.160
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	1.100
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	0.950
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	1.220
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	0.920
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	0.920
SRP279888	Gastro	Gastrodia elata tuber	2.07
	Juven	Juvenile tuber	3.12
	Mother_Gastro	Mother tuber of Gastrodia elata	3.89
	Mother_Juven	Mother tuber of Juvenile	3.44