Detail information of GWHGAAEX001327/evm.TU.scaffold_108.107


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743775661|ref|XP_010918217.1|4.52E-30PREDICTED: uncharacterized protein LOC105042631 [Elaeis guineensis]
Swissprottr|P32295|ARG7_VIGRR2.00E-10Indole-3-acetic acid-induced protein ARG7
trEMBLtr|M0RSV7|M0RSV7_MUSAM3.00E-28Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P16770_001}
TAIRAT1G761907.00E-23SAUR-like auxin-responsive protein family

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011727602362760819+
Transcript Sequence

Network for GWHGAAEX001327

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02519.13Auxin_inducible25922.20E-21
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0009733Biological Processresponse to auxin

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms8.650
SRR2545915Juvenile tuber8.980
SRP108465SRR5643513five period of Gastrodia elata6.590
SRR5643514five period of Gastrodia elata9.670
SRR5643515five period of Gastrodia elata8.650
SRR5643524five period of Gastrodia elata10.580
SRR5643525five period of Gastrodia elata18.650
SRR5643528five period of Gastrodia elata8.270
SRR5643658five period of Gastrodia elata18.720
SRR5643659five period of Gastrodia elata5.480
SRR5643660five period of Gastrodia elata8.100
SRR5643661five period of Gastrodia elata5.930
SRR5643662five period of Gastrodia elata5.410
SRR5643663five period of Gastrodia elata5.920
SRR5643664five period of Gastrodia elata8.650
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_18.420
SRR6049655Rhizomagastrodiae_C368-T10_good_13.500
SRR6049656Rhizomagastrodiae_C368-T07_good_16.720
SRR6049657Rhizomagastrodiae_C368-T07_good_17.080
SRR6049658Rhizomagastrodiae_C368-T04_good_15.230
SRR6049659Rhizomagastrodiae_C368-T04_good_13.820
SRR6049660Rhizomagastrodiae_C368-T01_good_14.920
SRR6049661Rhizomagastrodiae_C368-T04_good_15.650
SRR6049662Rhizomagastrodiae_C368-T01_good_13.370
SRR6049663Rhizomagastrodiae_C368-T01_good_13.030
SRR6049664Rhizomagastrodiae_C368-T10_good_14.000
SRR6049665Rhizomagastrodiae_C368-T10_good_14.000
SRP279888GastroGastrodia elata tuber 11.55
JuvenJuvenile tuber12.49
Mother_GastroMother tuber of Gastrodia elata 12.65
Mother_JuvenMother tuber of Juvenile 9.48