Detail information of GWHGAAEX001329/evm.TU.scaffold_108.109


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|326518398|dbj|BAJ88228.1|6.42E-101predicted protein [Hordeum vulgare subsp. vulgare]
Swissprottr|Q10S70|EXLA1_ORYSJ2.00E-94Expansin-like A1 (Precursor)
trEMBLtr|F2CZF7|F2CZF7_HORVD2.00E-101Predicted protein {ECO:0000313|EMBL:BAJ88228.1}
TAIRAT4G384008.00E-78expansin-like A2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011727682542770675+
Transcript Sequence

Network for GWHGAAEX001329

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03330.17DPBB_1571335.70E-09
PF01357.20Pollen_allerg_11472301.00E-19
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005576Cellular Componentextracellular region

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms15.840
SRR2545915Juvenile tuber26.800
SRP108465SRR5643513five period of Gastrodia elata47.160
SRR5643514five period of Gastrodia elata20.500
SRR5643515five period of Gastrodia elata73.070
SRR5643524five period of Gastrodia elata19.590
SRR5643525five period of Gastrodia elata259.420
SRR5643528five period of Gastrodia elata105.590
SRR5643658five period of Gastrodia elata419.270
SRR5643659five period of Gastrodia elata19.950
SRR5643660five period of Gastrodia elata14.350
SRR5643661five period of Gastrodia elata12.700
SRR5643662five period of Gastrodia elata12.110
SRR5643663five period of Gastrodia elata10.580
SRR5643664five period of Gastrodia elata42.850
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_180.330
SRR6049655Rhizomagastrodiae_C368-T10_good_123.570
SRR6049656Rhizomagastrodiae_C368-T07_good_177.150
SRR6049657Rhizomagastrodiae_C368-T07_good_169.760
SRR6049658Rhizomagastrodiae_C368-T04_good_155.920
SRR6049659Rhizomagastrodiae_C368-T04_good_155.250
SRR6049660Rhizomagastrodiae_C368-T01_good_1107.000
SRR6049661Rhizomagastrodiae_C368-T04_good_168.530
SRR6049662Rhizomagastrodiae_C368-T01_good_135.120
SRR6049663Rhizomagastrodiae_C368-T01_good_199.800
SRR6049664Rhizomagastrodiae_C368-T10_good_149.800
SRR6049665Rhizomagastrodiae_C368-T10_good_149.800
SRP279888GastroGastrodia elata tuber 32.17
JuvenJuvenile tuber27.47
Mother_GastroMother tuber of Gastrodia elata 187.34
Mother_JuvenMother tuber of Juvenile 55.04