Detail information of GWHGAAEX001331/evm.TU.scaffold_108.113
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|71907234|ref|YP_284821.1| | 3.00E-13 | protein kinase:GAF [Dechloromonas aromatica RCB] |
| nr | gi|720032464|ref|XP_010266119.1| | 0 | PREDICTED: probable serine/threonine-protein kinase At4g35230 [Nelumbo nucifera] |
| Swissprot | tr|Q944A7|Y4523_ARATH | 0 | Probable serine/threonine-protein kinase At4g35230 |
| trEMBL | tr|B9H1Q4|B9H1Q4_POPTR | 0 | Kinase family protein {ECO:0000313|EMBL:EEE86734.1} |
| TAIR | AT4G35230 | 0 | BR-signaling kinase 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000117 | 2819936 | 2862817 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX001331
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 81 | 315 | 7.70E-26 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_RLCK-XII-1 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K14500 | BSK | Plant hormone signal transduction | map04075 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005515 | Molecular Function | protein binding |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 58.910 |
| SRR2545915 | Juvenile tuber | 94.230 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 55.410 |
| SRR5643514 | five period of Gastrodia elata | 54.140 | |
| SRR5643515 | five period of Gastrodia elata | 57.870 | |
| SRR5643524 | five period of Gastrodia elata | 52.870 | |
| SRR5643525 | five period of Gastrodia elata | 60.300 | |
| SRR5643528 | five period of Gastrodia elata | 73.120 | |
| SRR5643658 | five period of Gastrodia elata | 74.370 | |
| SRR5643659 | five period of Gastrodia elata | 69.230 | |
| SRR5643660 | five period of Gastrodia elata | 80.740 | |
| SRR5643661 | five period of Gastrodia elata | 75.230 | |
| SRR5643662 | five period of Gastrodia elata | 78.460 | |
| SRR5643663 | five period of Gastrodia elata | 72.480 | |
| SRR5643664 | five period of Gastrodia elata | 95.380 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 50.690 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 38.920 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 49.280 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 58.910 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 54.420 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 52.860 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 53.330 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 52.450 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 39.760 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 42.020 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 36.430 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 36.430 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 77.86 |
| Juven | Juvenile tuber | 110.63 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 69.44 | |
| Mother_Juven | Mother tuber of Juvenile | 92.20 |