Detail information of GWHGAAEX001333/evm.TU.scaffold_108.116


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743833306|ref|XP_010935230.1|4.92E-115PREDICTED: protein FEZ-like [Elaeis guineensis]
Swissprottr|Q9FIW5|NAC94_ARATH3.00E-58Putative NAC domain-containing protein 94
trEMBLtr|M0RWH9|M0RWH9_MUSAM3.00E-109Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P02710_001}
TAIRAT2G170402.00E-85NAC domain containing protein 36

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011728814202883555-
Transcript Sequence

Network for GWHGAAEX001333

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02365.14NAM121389.30E-33
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyNAC

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.100
SRR2545915Juvenile tuber0.000
SRP108465SRR5643513five period of Gastrodia elata22.990
SRR5643514five period of Gastrodia elata30.370
SRR5643515five period of Gastrodia elata21.250
SRR5643524five period of Gastrodia elata18.480
SRR5643525five period of Gastrodia elata0.000
SRR5643528five period of Gastrodia elata0.000
SRR5643658five period of Gastrodia elata0.000
SRR5643659five period of Gastrodia elata0.170
SRR5643660five period of Gastrodia elata0.230
SRR5643661five period of Gastrodia elata0.090
SRR5643662five period of Gastrodia elata0.090
SRR5643663five period of Gastrodia elata0.000
SRR5643664five period of Gastrodia elata0.040
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_155.120
SRR6049655Rhizomagastrodiae_C368-T10_good_138.520
SRR6049656Rhizomagastrodiae_C368-T07_good_139.360
SRR6049657Rhizomagastrodiae_C368-T07_good_122.160
SRR6049658Rhizomagastrodiae_C368-T04_good_129.520
SRR6049659Rhizomagastrodiae_C368-T04_good_124.690
SRR6049660Rhizomagastrodiae_C368-T01_good_115.600
SRR6049661Rhizomagastrodiae_C368-T04_good_119.050
SRR6049662Rhizomagastrodiae_C368-T01_good_141.500
SRR6049663Rhizomagastrodiae_C368-T01_good_136.890
SRR6049664Rhizomagastrodiae_C368-T10_good_1112.530
SRR6049665Rhizomagastrodiae_C368-T10_good_1112.530
SRP279888GastroGastrodia elata tuber 0.03
JuvenJuvenile tuber0.00
Mother_GastroMother tuber of Gastrodia elata 2.06
Mother_JuvenMother tuber of Juvenile 0.40