Detail information of GWHGAAEX001335/evm.TU.scaffold_108.120


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|15596490|ref|NP_249984.1|2.00E-72hypothetical protein PA1293 [Pseudomonas aeruginosa PAO1]
KOGKOG15205.00E-113Predicted alkaloid synthase/Surface mucin Hemomucin
nrgi|720032512|ref|XP_010266134.1|6.21E-142PREDICTED: protein YLS2-like [Nelumbo nucifera]
Swissprottr|Q9SD05|SSL6_ARATH1.00E-113Protein STRICTOSIDINE SYNTHASE-LIKE 6 {ECO:0000303|PubMed:10777701} (Precursor)
trEMBLtr|K4ABL7|K4ABL7_SETIT3.00E-135Uncharacterized protein {ECO:0000313|EnsemblPlants:Si036274m}
TAIRAT3G514405.00E-113Calcium-dependent phosphotriesterase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011729791322994286+
Transcript Sequence

Network for GWHGAAEX001335

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03088.15Str_synth1532393.00E-32
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0009058Biological Processbiosynthetic process
GO:0016844Molecular Functionstrictosidine synthase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms189.410
SRR2545915Juvenile tuber42.820
SRP108465SRR5643513five period of Gastrodia elata238.200
SRR5643514five period of Gastrodia elata82.020
SRR5643515five period of Gastrodia elata171.540
SRR5643524five period of Gastrodia elata99.060
SRR5643525five period of Gastrodia elata83.080
SRR5643528five period of Gastrodia elata74.040
SRR5643658five period of Gastrodia elata66.830
SRR5643659five period of Gastrodia elata65.410
SRR5643660five period of Gastrodia elata68.300
SRR5643661five period of Gastrodia elata66.340
SRR5643662five period of Gastrodia elata73.180
SRR5643663five period of Gastrodia elata51.610
SRR5643664five period of Gastrodia elata80.300
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1185.020
SRR6049655Rhizomagastrodiae_C368-T10_good_1151.140
SRR6049656Rhizomagastrodiae_C368-T07_good_1115.500
SRR6049657Rhizomagastrodiae_C368-T07_good_1255.670
SRR6049658Rhizomagastrodiae_C368-T04_good_1251.150
SRR6049659Rhizomagastrodiae_C368-T04_good_1309.790
SRR6049660Rhizomagastrodiae_C368-T01_good_1175.980
SRR6049661Rhizomagastrodiae_C368-T04_good_1220.450
SRR6049662Rhizomagastrodiae_C368-T01_good_171.080
SRR6049663Rhizomagastrodiae_C368-T01_good_175.490
SRR6049664Rhizomagastrodiae_C368-T10_good_1129.060
SRR6049665Rhizomagastrodiae_C368-T10_good_1129.060
SRP279888GastroGastrodia elata tuber 89.02
JuvenJuvenile tuber132.67
Mother_GastroMother tuber of Gastrodia elata 178.73
Mother_JuvenMother tuber of Juvenile 270.97