Detail information of GWHGAAEX001337/evm.TU.scaffold_108.125


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|479149505|ref|YP_007779934.1|2.00E-22Serine/threonine protein kinase [Roseburia intestinalis XB6B4]
KOGKOG11878.00E-142Serine/threonine protein kinase
nrgi|694995873|ref|XP_009390872.1|4.87E-165PREDICTED: serine/threonine-protein kinase PBS1-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q0WRY5|CDL1_ARATH2.00E-136Serine/threonine-protein kinase CDL1 {ECO:0000305}
trEMBLtr|M0RWI6|M0RWI6_MUSAM7.00E-167Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P02780_001}
TAIRAT5G186108.00E-142Protein kinase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011730547213064447-
Transcript Sequence

Network for GWHGAAEX001337

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase732612.50E-37
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_RLCK-VIIa-1

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0004672Molecular Functionprotein kinase activity
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms10.950
SRR2545915Juvenile tuber10.970
SRP108465SRR5643513five period of Gastrodia elata14.070
SRR5643514five period of Gastrodia elata13.630
SRR5643515five period of Gastrodia elata16.040
SRR5643524five period of Gastrodia elata14.040
SRR5643525five period of Gastrodia elata13.060
SRR5643528five period of Gastrodia elata9.440
SRR5643658five period of Gastrodia elata13.130
SRR5643659five period of Gastrodia elata14.530
SRR5643660five period of Gastrodia elata13.170
SRR5643661five period of Gastrodia elata13.610
SRR5643662five period of Gastrodia elata13.290
SRR5643663five period of Gastrodia elata15.450
SRR5643664five period of Gastrodia elata15.100
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.360
SRR6049655Rhizomagastrodiae_C368-T10_good_111.630
SRR6049656Rhizomagastrodiae_C368-T07_good_112.290
SRR6049657Rhizomagastrodiae_C368-T07_good_110.890
SRR6049658Rhizomagastrodiae_C368-T04_good_18.670
SRR6049659Rhizomagastrodiae_C368-T04_good_17.070
SRR6049660Rhizomagastrodiae_C368-T01_good_18.310
SRR6049661Rhizomagastrodiae_C368-T04_good_110.370
SRR6049662Rhizomagastrodiae_C368-T01_good_110.960
SRR6049663Rhizomagastrodiae_C368-T01_good_18.330
SRR6049664Rhizomagastrodiae_C368-T10_good_113.820
SRR6049665Rhizomagastrodiae_C368-T10_good_113.820
SRP279888GastroGastrodia elata tuber 16.56
JuvenJuvenile tuber12.84
Mother_GastroMother tuber of Gastrodia elata 8.92
Mother_JuvenMother tuber of Juvenile 7.65