Detail information of GWHGAAEX001341/evm.TU.scaffold_108.129


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|48477207|ref|YP_022913.1|4.00E-27serine/threonine protein kinase [Picrophilus torridus DSM 9790]
KOGKOG05940Protein kinase PCTAIRE and related kinases
nrgi|326422262|gb|ADZ74120.1|0A-type cyclin dependent kinase 1 [Dendrobium candidum]
Swissprottr|Q38772|CDC2A_ANTMA0Cell division control protein 2 homolog A
trEMBLtr|G8DRF9|G8DRF9_9ASPA0A-type cyclin dependent kinase 1 {ECO:0000313|EMBL:ADZ74120.1}
TAIRAT3G487500cell division control 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011731592653181919-
Transcript Sequence

Network for GWHGAAEX001341

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase42874.90E-79
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCMGC_CDK-Pl

KEGG pathway

KO Enzyme pathway mapID
K02206CDK2 FoxO signaling pathway map04068
PI3K-Akt signaling pathwaymap04151
Cell cyclemap04110
Oocyte meiosismap04114
p53 signaling pathwaymap04115
Cellular senescencemap04218
Progesterone-mediated oocyte maturationmap04914

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms35.030
SRR2545915Juvenile tuber40.640
SRP108465SRR5643513five period of Gastrodia elata49.360
SRR5643514five period of Gastrodia elata51.420
SRR5643515five period of Gastrodia elata44.340
SRR5643524five period of Gastrodia elata46.720
SRR5643525five period of Gastrodia elata61.690
SRR5643528five period of Gastrodia elata53.800
SRR5643658five period of Gastrodia elata65.750
SRR5643659five period of Gastrodia elata44.200
SRR5643660five period of Gastrodia elata54.410
SRR5643661five period of Gastrodia elata47.720
SRR5643662five period of Gastrodia elata56.850
SRR5643663five period of Gastrodia elata46.720
SRR5643664five period of Gastrodia elata56.380
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_151.650
SRR6049655Rhizomagastrodiae_C368-T10_good_148.560
SRR6049656Rhizomagastrodiae_C368-T07_good_147.940
SRR6049657Rhizomagastrodiae_C368-T07_good_152.750
SRR6049658Rhizomagastrodiae_C368-T04_good_147.370
SRR6049659Rhizomagastrodiae_C368-T04_good_147.350
SRR6049660Rhizomagastrodiae_C368-T01_good_147.000
SRR6049661Rhizomagastrodiae_C368-T04_good_149.250
SRR6049662Rhizomagastrodiae_C368-T01_good_152.060
SRR6049663Rhizomagastrodiae_C368-T01_good_148.850
SRR6049664Rhizomagastrodiae_C368-T10_good_153.900
SRR6049665Rhizomagastrodiae_C368-T10_good_153.900
SRP279888GastroGastrodia elata tuber 55.42
JuvenJuvenile tuber52.04
Mother_GastroMother tuber of Gastrodia elata 45.63
Mother_JuvenMother tuber of Juvenile 48.46