Detail information of GWHGAAEX001356/evm.TU.scaffold_108.149


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743861943|ref|XP_010943415.1|3.12E-38PREDICTED: B3 domain-containing protein Os04g0386900-like [Elaeis guineensis]
Swissprottr|Q7XLP4|Y4869_ORYSJ5.00E-26B3 domain-containing protein Os04g0386900
trEMBLtr|M0S563|M0S563_MUSAM8.00E-33Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P04720_001}

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011734919893494140-
Transcript Sequence

Network for GWHGAAEX001356

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02362.20B3561486.50E-15
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyB3

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms44.290
SRR2545915Juvenile tuber42.250
SRP108465SRR5643513five period of Gastrodia elata11.080
SRR5643514five period of Gastrodia elata14.030
SRR5643515five period of Gastrodia elata12.350
SRR5643524five period of Gastrodia elata15.950
SRR5643525five period of Gastrodia elata7.020
SRR5643528five period of Gastrodia elata9.540
SRR5643658five period of Gastrodia elata9.100
SRR5643659five period of Gastrodia elata11.490
SRR5643660five period of Gastrodia elata15.110
SRR5643661five period of Gastrodia elata10.380
SRR5643662five period of Gastrodia elata15.610
SRR5643663five period of Gastrodia elata10.360
SRR5643664five period of Gastrodia elata13.840
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_121.250
SRR6049655Rhizomagastrodiae_C368-T10_good_16.150
SRR6049656Rhizomagastrodiae_C368-T07_good_129.010
SRR6049657Rhizomagastrodiae_C368-T07_good_122.020
SRR6049658Rhizomagastrodiae_C368-T04_good_135.040
SRR6049659Rhizomagastrodiae_C368-T04_good_125.760
SRR6049660Rhizomagastrodiae_C368-T01_good_125.680
SRR6049661Rhizomagastrodiae_C368-T04_good_137.170
SRR6049662Rhizomagastrodiae_C368-T01_good_126.640
SRR6049663Rhizomagastrodiae_C368-T01_good_129.600
SRR6049664Rhizomagastrodiae_C368-T10_good_116.490
SRR6049665Rhizomagastrodiae_C368-T10_good_116.490
SRP279888GastroGastrodia elata tuber 27.01
JuvenJuvenile tuber17.24
Mother_GastroMother tuber of Gastrodia elata 20.21
Mother_JuvenMother tuber of Juvenile 16.39