Detail information of GWHGAAEX001364/evm.TU.scaffold_109.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG22340Predicted UDP-galactose transporter
nrgi|359478080|ref|XP_003632066.1|0PREDICTED: CMP-sialic acid transporter 2 [Vitis vinifera]
Swissprottr|Q9C5H6|CSTR3_ARATH0CMP-sialic acid transporter 3
trEMBLtr|D7U8X0|D7U8X0_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI39184.3}
TAIRAT3G593600UDP-galactose transporter 6

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000001142341554160-
Transcript Sequence

Network for GWHGAAEX001364

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04142.14Nuc_sug_transp463459.50E-33
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0090481Biological Processpyrimidine nucleotide-sugar transmembrane transport
GO:0015165Molecular Functionpyrimidine nucleotide-sugar transmembrane transporter activity
GO:0000139Cellular ComponentGolgi membrane
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms29.620
SRR2545915Juvenile tuber38.120
SRP108465SRR5643513five period of Gastrodia elata23.070
SRR5643514five period of Gastrodia elata21.920
SRR5643515five period of Gastrodia elata29.210
SRR5643524five period of Gastrodia elata24.770
SRR5643525five period of Gastrodia elata38.520
SRR5643528five period of Gastrodia elata34.810
SRR5643658five period of Gastrodia elata41.070
SRR5643659five period of Gastrodia elata21.030
SRR5643660five period of Gastrodia elata28.290
SRR5643661five period of Gastrodia elata23.530
SRR5643662five period of Gastrodia elata28.880
SRR5643663five period of Gastrodia elata26.660
SRR5643664five period of Gastrodia elata23.400
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_121.910
SRR6049655Rhizomagastrodiae_C368-T10_good_120.920
SRR6049656Rhizomagastrodiae_C368-T07_good_125.620
SRR6049657Rhizomagastrodiae_C368-T07_good_119.370
SRR6049658Rhizomagastrodiae_C368-T04_good_119.280
SRR6049659Rhizomagastrodiae_C368-T04_good_117.560
SRR6049660Rhizomagastrodiae_C368-T01_good_120.210
SRR6049661Rhizomagastrodiae_C368-T04_good_124.010
SRR6049662Rhizomagastrodiae_C368-T01_good_121.910
SRR6049663Rhizomagastrodiae_C368-T01_good_121.350
SRR6049664Rhizomagastrodiae_C368-T10_good_125.800
SRR6049665Rhizomagastrodiae_C368-T10_good_125.800
SRP279888GastroGastrodia elata tuber 26.88
JuvenJuvenile tuber24.00
Mother_GastroMother tuber of Gastrodia elata 42.96
Mother_JuvenMother tuber of Juvenile 49.03