Gene detail

Database	Orthologs	E value	Annotation
COG	gi\|357388752\|ref\|YP_004903591.1\|	3.00E-07	hypothetical protein KSE_18100 [Kitasatospora setae KM-6054]
KOG	KOG0366	4.00E-174	Protein geranylgeranyltransferase type II, beta subunit
nr	gi\|743818046\|ref\|XP_010931105.1\|	0	PREDICTED: geranylgeranyl transferase type-2 subunit beta-like isoform X1 [Elaeis guineensis]
Swissprot	tr\|O80642\|PGTB1_ARATH	4.00E-43	Geranylgeranyl transferase type-1 subunit beta
trEMBL	tr\|A0A061FRM0\|A0A061FRM0_THECC	0	RAB geranylgeranyl transferase beta subunit 1 {ECO:0000313\|EMBL:EOY19312.1}
TAIR	AT5G12210	4.00E-174	RAB geranylgeranyl transferase beta subunit 1

Scaffold	Start	End	Strand
GWHAAEX00000114	67124	74744	+

Transcript Sequence
>GWHTAAEX001366 ATGGGAGAGTTGGAAGTTCACAAGCATGTACAATACATTCTCTCTGTTGAAAAGAAAAAAGATTGTTTTGAGGCTTTGGTTATGGAGCATCTGAGAATGAACGGTGCTTATTGGGGTTTAACCACTTTAGATCTTCTTCATAATATTTCAACAATTGATCAAGCAGAGGTTATATCGTGGTTGATGTCATGTTGGGATGCAGAAATCGGAGGTTTTGCTGGAACTATTGGACATGATCCTCATCTTCTGCATACCCTTAGTGCTGTTCAAATTTTAGCTCTTTTTAATAGGCTAGACGTTCTTGACATAGAGATGATCTCTAAATACGTTGCCGGGTTACAAAATGAAGATGGATCATTTTCCGGTGATATGTGGGGTGAAATCGATACTAGGTTTTCTTACTGCGCAATTTGCTGTCTCTCGATTTTACGCTGCCTTGATAAAATTGATGTGGCTAATGCTGTGAACTATATTGTGAGCTGTAAAAATTTGGATGGTGGATTTGGAACCACGCCTGGAGGGGAGTCTCATGCTGGCCAAATCTTTTGCTGTGTGGGTGCCCTTGCCATCACAGGATCTCTGCACCATGTTGAAAGGGATCTTCTTGGCTGGTGGCTATGCGAGCGACAATGCACGGATGGCGGTTTGAATGGGCGCCCGGAGAAACTTTCCGATGTTTGTTATTCTTGGTGGGTGCTTTCAAGCTTGACTATGATCGATCGTGTGCATTGGATTGACAAAAGTAAACTTGCCAAGTTCATCTTAAACTGCCAGGACATTGAAAACGGGGGAATTTCAGATAGGCCGGATAATGCTGTTGATGTTTTTCATACTTTCTTTGGAGTTGCAGGTCTTTCGCTGATGGAATATCAAGGATTGAAGCCTATTGATCCGGCTTATGCATTGCCAGTTGATGTTGTCAATCGGATCTTCTTTGATGGCAAGTGTTGA

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Module ID	Function Annotation
Module4

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00432.20	Prenyltrans	52	94	5.00E-09
PF00432.20	Prenyltrans	104	143	2.30E-11
PF00432.20	Prenyltrans	149	192	1.60E-13
PF00432.20	Prenyltrans	199	240	1.70E-12
PF00432.20	Prenyltrans	245	288	1.00E-11

Protein Sequence

Gene family	subfamily
--	--

KO	Enzyme	pathway	mapID
--	--	--	--

GO term	Ontology	Name
GO:0018344	Biological Process	protein geranylgeranylation
GO:0003824	Molecular Function	catalytic activity
GO:0004663	Molecular Function	Rab geranylgeranyltransferase activity

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	90.460
SRP064423	SRR2545915	Juvenile tuber	68.100
SRP108465	SRR5643513	five period of Gastrodia elata	38.730
	SRR5643514	five period of Gastrodia elata	34.950
	SRR5643515	five period of Gastrodia elata	30.170
	SRR5643524	five period of Gastrodia elata	27.430
	SRR5643525	five period of Gastrodia elata	70.620
	SRR5643528	five period of Gastrodia elata	51.230
	SRR5643658	five period of Gastrodia elata	71.190
	SRR5643659	five period of Gastrodia elata	26.550
	SRR5643660	five period of Gastrodia elata	23.700
	SRR5643661	five period of Gastrodia elata	23.310
	SRR5643662	five period of Gastrodia elata	24.040
	SRR5643663	five period of Gastrodia elata	31.810
	SRR5643664	five period of Gastrodia elata	28.760
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	75.260
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	42.440
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	74.370
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	79.490
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	111.550
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	125.790
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	99.510
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	100.730
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	99.600
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	118.470
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	74.310
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	74.310
SRP279888	Gastro	Gastrodia elata tuber	55.93
	Juven	Juvenile tuber	52.13
	Mother_Gastro	Mother tuber of Gastrodia elata	134.26
	Mother_Juven	Mother tuber of Juvenile	77.89