Detail information of GWHGAAEX001375/evm.TU.scaffold_109.14


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|521462539|ref|YP_008149401.1|5.00E-24hypothetical protein SCE1572_14835 [Sorangium cellulosum So0157-2]
KOGKOG06580Glycogen synthase kinase-3
nrgi|720066435|ref|XP_010276519.1|0PREDICTED: shaggy-related protein kinase alpha [Nelumbo nucifera]
Swissprottr|P43289|KSG3_ARATH0Shaggy-related protein kinase gamma
trEMBLtr|A0A061DRE9|A0A061DRE9_THECC0Shaggy-related kinase 11, 11 isoform 1 {ECO:0000313|EMBL:EOX95384.1}
TAIRAT3G058400Protein kinase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000114544151549530-
Transcript Sequence

Network for GWHGAAEX001375

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase733579.20E-65
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCMGC_GSK

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms311.960
SRR2545915Juvenile tuber315.020
SRP108465SRR5643513five period of Gastrodia elata152.340
SRR5643514five period of Gastrodia elata151.010
SRR5643515five period of Gastrodia elata163.870
SRR5643524five period of Gastrodia elata152.140
SRR5643525five period of Gastrodia elata265.710
SRR5643528five period of Gastrodia elata338.640
SRR5643658five period of Gastrodia elata306.940
SRR5643659five period of Gastrodia elata147.620
SRR5643660five period of Gastrodia elata144.640
SRR5643661five period of Gastrodia elata152.050
SRR5643662five period of Gastrodia elata157.760
SRR5643663five period of Gastrodia elata133.700
SRR5643664five period of Gastrodia elata149.640
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1182.110
SRR6049655Rhizomagastrodiae_C368-T10_good_1217.360
SRR6049656Rhizomagastrodiae_C368-T07_good_1188.720
SRR6049657Rhizomagastrodiae_C368-T07_good_1193.020
SRR6049658Rhizomagastrodiae_C368-T04_good_1254.230
SRR6049659Rhizomagastrodiae_C368-T04_good_1282.910
SRR6049660Rhizomagastrodiae_C368-T01_good_1239.340
SRR6049661Rhizomagastrodiae_C368-T04_good_1235.110
SRR6049662Rhizomagastrodiae_C368-T01_good_1192.510
SRR6049663Rhizomagastrodiae_C368-T01_good_1241.070
SRR6049664Rhizomagastrodiae_C368-T10_good_1187.640
SRR6049665Rhizomagastrodiae_C368-T10_good_1187.640
SRP279888GastroGastrodia elata tuber 159.47
JuvenJuvenile tuber102.41
Mother_GastroMother tuber of Gastrodia elata 350.71
Mother_JuvenMother tuber of Juvenile 205.37