Detail information of GWHGAAEX001385/evm.TU.scaffold_109.25


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743863784|ref|XP_010943875.1|0PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic isoform X1 [Elaeis guineensis]
Swissprottr|Q9M903|TGD4_ARATH1.00E-137Protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic
trEMBLtr|M0TPE6|M0TPE6_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P10930_001}
TAIRAT3G069605.00E-137pigment defective 320

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000114791091855696-
Transcript Sequence

Network for GWHGAAEX001385

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms5.360
SRR2545915Juvenile tuber9.020
SRP108465SRR5643513five period of Gastrodia elata9.930
SRR5643514five period of Gastrodia elata11.720
SRR5643515five period of Gastrodia elata9.350
SRR5643524five period of Gastrodia elata11.930
SRR5643525five period of Gastrodia elata3.960
SRR5643528five period of Gastrodia elata2.910
SRR5643658five period of Gastrodia elata4.530
SRR5643659five period of Gastrodia elata7.620
SRR5643660five period of Gastrodia elata7.540
SRR5643661five period of Gastrodia elata8.670
SRR5643662five period of Gastrodia elata9.130
SRR5643663five period of Gastrodia elata8.610
SRR5643664five period of Gastrodia elata8.250
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_18.980
SRR6049655Rhizomagastrodiae_C368-T10_good_111.600
SRR6049656Rhizomagastrodiae_C368-T07_good_19.630
SRR6049657Rhizomagastrodiae_C368-T07_good_17.930
SRR6049658Rhizomagastrodiae_C368-T04_good_15.520
SRR6049659Rhizomagastrodiae_C368-T04_good_14.700
SRR6049660Rhizomagastrodiae_C368-T01_good_18.170
SRR6049661Rhizomagastrodiae_C368-T04_good_15.790
SRR6049662Rhizomagastrodiae_C368-T01_good_18.830
SRR6049663Rhizomagastrodiae_C368-T01_good_18.390
SRR6049664Rhizomagastrodiae_C368-T10_good_110.590
SRR6049665Rhizomagastrodiae_C368-T10_good_110.590
SRP279888GastroGastrodia elata tuber 9.81
JuvenJuvenile tuber14.02
Mother_GastroMother tuber of Gastrodia elata 8.84
Mother_JuvenMother tuber of Juvenile 11.31