Detail information of GWHGAAEX001394/evm.TU.scaffold_109.34


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|501676268|ref|YP_007996595.1|2.00E-41Rhodanese-like protein [Strawberry lethal yellows phytoplasma (CPA) str. NZSb11]
nrgi|743768706|ref|XP_010914629.1|0PREDICTED: rhodanese-like domain-containing protein 6 isoform X1 [Elaeis guineensis]
Swissprottr|Q94AC1|STR6_ARATH0Rhodanese-like domain-containing protein 6
trEMBLtr|V4TB23|V4TB23_9ROSI0Uncharacterized protein {ECO:0000313|EMBL:ESR46796.1}
TAIRAT1G09280_12.00E-130Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011410315431082910+
Transcript Sequence

Network for GWHGAAEX001394

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12368.7Rhodanese_C2653313.70E-14
PF03959.12FSH13876151.10E-44
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms42.180
SRR2545915Juvenile tuber70.910
SRP108465SRR5643513five period of Gastrodia elata28.090
SRR5643514five period of Gastrodia elata31.710
SRR5643515five period of Gastrodia elata52.260
SRR5643524five period of Gastrodia elata25.150
SRR5643525five period of Gastrodia elata384.370
SRR5643528five period of Gastrodia elata379.730
SRR5643658five period of Gastrodia elata797.680
SRR5643659five period of Gastrodia elata90.350
SRR5643660five period of Gastrodia elata86.330
SRR5643661five period of Gastrodia elata96.850
SRR5643662five period of Gastrodia elata65.720
SRR5643663five period of Gastrodia elata174.630
SRR5643664five period of Gastrodia elata69.390
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_125.050
SRR6049655Rhizomagastrodiae_C368-T10_good_119.610
SRR6049656Rhizomagastrodiae_C368-T07_good_144.230
SRR6049657Rhizomagastrodiae_C368-T07_good_131.630
SRR6049658Rhizomagastrodiae_C368-T04_good_117.790
SRR6049659Rhizomagastrodiae_C368-T04_good_121.650
SRR6049660Rhizomagastrodiae_C368-T01_good_120.380
SRR6049661Rhizomagastrodiae_C368-T04_good_124.660
SRR6049662Rhizomagastrodiae_C368-T01_good_120.510
SRR6049663Rhizomagastrodiae_C368-T01_good_119.240
SRR6049664Rhizomagastrodiae_C368-T10_good_126.380
SRR6049665Rhizomagastrodiae_C368-T10_good_126.380
SRP279888GastroGastrodia elata tuber 32.24
JuvenJuvenile tuber48.49
Mother_GastroMother tuber of Gastrodia elata 43.21
Mother_JuvenMother tuber of Juvenile 22.33