Detail information of GWHGAAEX001399/evm.TU.scaffold_109.40


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG29113.00E-112Uncharacterized conserved protein
nrgi|743762710|ref|XP_010909481.1|0PREDICTED: uncharacterized protein LOC105035575 [Elaeis guineensis]
trEMBLtr|A0A067JZZ1|A0A067JZZ1_JATCU5.00E-123Uncharacterized protein {ECO:0000313|EMBL:KDP28353.1}
TAIRAT3G620803.00E-112SNF7 family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011412261521275930-
Transcript Sequence

Network for GWHGAAEX001399

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03357.20Snf72393961.10E-09
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K15053CHMP7 Endocytosis map04144
Necroptosismap04217

Gene Ontology

GO term OntologyName
GO:0007034Biological Processvacuolar transport

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms12.330
SRR2545915Juvenile tuber9.640
SRP108465SRR5643513five period of Gastrodia elata6.470
SRR5643514five period of Gastrodia elata6.490
SRR5643515five period of Gastrodia elata7.770
SRR5643524five period of Gastrodia elata7.900
SRR5643525five period of Gastrodia elata10.020
SRR5643528five period of Gastrodia elata14.550
SRR5643658five period of Gastrodia elata12.330
SRR5643659five period of Gastrodia elata6.540
SRR5643660five period of Gastrodia elata6.950
SRR5643661five period of Gastrodia elata6.890
SRR5643662five period of Gastrodia elata6.720
SRR5643663five period of Gastrodia elata6.320
SRR5643664five period of Gastrodia elata7.610
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_15.640
SRR6049655Rhizomagastrodiae_C368-T10_good_14.810
SRR6049656Rhizomagastrodiae_C368-T07_good_16.450
SRR6049657Rhizomagastrodiae_C368-T07_good_17.380
SRR6049658Rhizomagastrodiae_C368-T04_good_18.360
SRR6049659Rhizomagastrodiae_C368-T04_good_17.190
SRR6049660Rhizomagastrodiae_C368-T01_good_17.230
SRR6049661Rhizomagastrodiae_C368-T04_good_15.750
SRR6049662Rhizomagastrodiae_C368-T01_good_15.620
SRR6049663Rhizomagastrodiae_C368-T01_good_16.350
SRR6049664Rhizomagastrodiae_C368-T10_good_15.230
SRR6049665Rhizomagastrodiae_C368-T10_good_15.230
SRP279888GastroGastrodia elata tuber 7.75
JuvenJuvenile tuber8.11
Mother_GastroMother tuber of Gastrodia elata 15.40
Mother_JuvenMother tuber of Juvenile 16.74