Detail information of GWHGAAEX001404/evm.TU.scaffold_109.47


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|659072682|ref|XP_008466730.1|5.00E-12PREDICTED: defensin J1-2-like [Cucumis melo]
Swissprottr|O65740|DEF2_CAPAN4.00E-13Defensin J1-2 (Precursor)
trEMBLtr|A0A0A0KJ50|A0A0A0KJ50_CUCSA2.00E-12Uncharacterized protein {ECO:0000313|EMBL:KGN49760.1}
TAIRAT2G021301.00E-10low-molecular-weight cysteine-rich 68

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011413983991400166+
Transcript Sequence

Network for GWHGAAEX001404

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00304.19Gamma-thionin24591.70E-12
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006952Biological Processdefense response

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms9.230
SRR2545915Juvenile tuber60.110
SRP108465SRR5643513five period of Gastrodia elata63.490
SRR5643514five period of Gastrodia elata13.610
SRR5643515five period of Gastrodia elata61.180
SRR5643524five period of Gastrodia elata46.290
SRR5643525five period of Gastrodia elata7.670
SRR5643528five period of Gastrodia elata10.140
SRR5643658five period of Gastrodia elata12.340
SRR5643659five period of Gastrodia elata53.940
SRR5643660five period of Gastrodia elata24.530
SRR5643661five period of Gastrodia elata69.460
SRR5643662five period of Gastrodia elata21.440
SRR5643663five period of Gastrodia elata56.880
SRR5643664five period of Gastrodia elata7.860
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_172.850
SRR6049655Rhizomagastrodiae_C368-T10_good_14.410
SRR6049656Rhizomagastrodiae_C368-T07_good_136.090
SRR6049657Rhizomagastrodiae_C368-T07_good_147.710
SRR6049658Rhizomagastrodiae_C368-T04_good_122.560
SRR6049659Rhizomagastrodiae_C368-T04_good_112.240
SRR6049660Rhizomagastrodiae_C368-T01_good_115.420
SRR6049661Rhizomagastrodiae_C368-T04_good_130.290
SRR6049662Rhizomagastrodiae_C368-T01_good_131.430
SRR6049663Rhizomagastrodiae_C368-T01_good_117.270
SRR6049664Rhizomagastrodiae_C368-T10_good_135.530
SRR6049665Rhizomagastrodiae_C368-T10_good_135.530
SRP279888GastroGastrodia elata tuber 6.09
JuvenJuvenile tuber1.34
Mother_GastroMother tuber of Gastrodia elata 0.62
Mother_JuvenMother tuber of Juvenile 0.38