Gene detail

Detail information of GWHGAAEX001408/evm.TU.scaffold_109.52

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672180195\|ref\|XP_008810280.1\|	9.22E-163	PREDICTED: uncharacterized protein At4g15970-like [Phoenix dactylifera]
Swissprot	tr\|P0C042\|Y4597_ARATH	3.00E-95	Uncharacterized protein At4g15970
trEMBL	tr\|K4ABI6\|K4ABI6_SETIT	5.00E-153	Uncharacterized protein {ECO:0000313\|EnsemblPlants:Si036243m}
TAIR	AT1G14590	4.00E-141	Nucleotide-diphospho-sugar transferase family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000114	1533925	1542550	+

Transcript Sequence
>GWHTAAEX001408 ATTTATTATTGGATGCGGCAAATTACAAAATAAAATTAATATAATTTTTATGAATCCGCTACCCGCGCCCTAAGAATAACCCAAACCCAAATGCGGAGCCGGCCGAGGAAGACGAAGCCAACGTCTGTCCTTTTCAGTGAAATTTCCAGCGTTGGATTCCTTCCGCCATCGATTCGTCATTACTTTTCAAAACCGTCAATTGCAGCCTCTCCTCCATTTCCGAGACATTCCTTTTTCAATAAATCATGCCCTAACCCTTGCCTTCAGCTCAGCCCGGTCCCTTCAATGCAGCCTGCTACCGCCGCGGCTATCAGCATCGAATCAGCCGAGCTAGGCCAACCGGCATCGCCGGTTCGGCCGGAATCAAATGTTCTACGGCGTGTTCCGGTTCAGCTGATCTTTCTCTTAGCCGTCGGCCTCTCCGTCGTTTTCGTCTACCGCGCAGCTAGCCCTTGGAATCTCACCGCCCCTTTCTTCGGTCACGCCAAGGATCCCCTCGATGACCTCGATTTGGACACGGAGGAAGTGAGGCTAGCCAGAGTTCTGAAGGCATCCGCAATGAATGATAAAACGGTGATATTAACGACCCTGAATGCCGCATGGGCATCCAACGGCACCATTATTGATCTGTTCCTCCAGAGCTTTCACATTGGCAACGGCACCAGTTCTCTGCTGGACCACTTGGTTATTGTTGCATTTGATAAAAAGACTTATCTCCGGTGCAGAGCCATACACCCTCACTGCTTTGCACTCACGACCGCCGGAATCGATTTTTCAGTGCTCGAAAATTTTATGACTGATGGGTACTTGAAAATGATGTGGAGGAGGATTGATTTCTTGAGGATTGTTCTTGAAATGGGATACAACTTCATTTTCACGGATGCAGATATAATGTGGTTCAGAAATCCGCTCCCGCGGTTCTTCCCTGATGGAGACTTTCAGATAGCTTGCGACTATTTTAACGGCAATCCCGATGATCGGAACAATAGACCAAACGGCGGGTTTAATTTCGTGAAATCCAGCAATCGCACGATAGAATTTTACAAATTCTGGTACTCGGCTCGAGAGAAGCACCCCGGACTCCACGACCAGGATGTGCTGAATTTGATCAAATTCGATCCGTTCATTGATCAAATAGGTTTGCGGATGCGGTTTTTAAGCACTGGCTTTTTCGGCGGATTATGCGAACCGAGCAGAGATTTCAATCAAGTCTGCACAATGCATGCAAATTGCTGCATTGGGCTCAGCAGAAAAATGATTGATTTGAGGGCAATGCTTGAAGACTGGAGAGGTTATATGGCCCTTCCGCCTGATTTAAAGATTTCAAAAATGCCTTCCTGGAGTGTTCCAAAAAATTGCAGCTTGGCTCCGCTTGATTAAGCAAATTTTGTCTGTAGTAGATTATGGCTTGAAGAACAAATTATGCTGTAAATATTCTCAGGGATTGGCTCAGAAAATCATAGCTGTAAAGATTATTGCTTCTTCCAACGCACTTTTTTTGGGGCAGAACAAACGAAAAAGCTGTTATGATCATTTTGGACAAATCATCAAACTGTAATTTTTGATGATATGAAAGCAAATAAGCATTTCTGTTTAAATAAAACTATCAATTTTGAATTGTTGTGTTACTTAGTTTGTATTGTAGATTTCTAAGTGAAAGGATTCTTTGCTATATTCTTAGTGGCTACTCTTTATTGTTAACATAATGTCTATATTTTATGGTTAATTTTCTTCATCAATGTAATGTCAATTCTTGATTTTGTGTTATTAAATGATATTAAGC

Network for GWHGAAEX001408

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03407.15	Nucleotid_trans	194	391	3.10E-63

Protein Sequence

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT77

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	20.410
SRP064423	SRR2545915	Juvenile tuber	7.390
SRP108465	SRR5643513	five period of Gastrodia elata	29.880
	SRR5643514	five period of Gastrodia elata	37.740
	SRR5643515	five period of Gastrodia elata	30.240
	SRR5643524	five period of Gastrodia elata	38.400
	SRR5643525	five period of Gastrodia elata	10.660
	SRR5643528	five period of Gastrodia elata	8.690
	SRR5643658	five period of Gastrodia elata	6.270
	SRR5643659	five period of Gastrodia elata	4.520
	SRR5643660	five period of Gastrodia elata	4.390
	SRR5643661	five period of Gastrodia elata	4.150
	SRR5643662	five period of Gastrodia elata	3.110
	SRR5643663	five period of Gastrodia elata	3.850
	SRR5643664	five period of Gastrodia elata	2.490
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	40.070
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	77.660
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	45.470
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	26.190
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	39.160
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	48.590
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	30.860
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	29.330
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	38.330
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	42.640
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	66.200
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	66.200
SRP279888	Gastro	Gastrodia elata tuber	2.63
	Juven	Juvenile tuber	7.35
	Mother_Gastro	Mother tuber of Gastrodia elata	93.34
	Mother_Juven	Mother tuber of Juvenile	36.72