Gene detail

Detail information of GWHGAAEX001410/evm.TU.scaffold_109.55

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG1311	2.00E-116	DHHC-type Zn-finger proteins
nr	gi\|743775894\|ref\|XP_010918341.1\|	5.00E-170	PREDICTED: protein S-acyltransferase 21 isoform X1 [Elaeis guineensis]
Swissprot	tr\|Q8L5Y5\|ZDH17_ARATH	3.00E-122	Probable protein S-acyltransferase 19
trEMBL	tr\|M0RUG3\|M0RUG3_MUSAM	2.00E-165	S-acyltransferase {ECO:0000256\|RuleBase:RU079119}
TAIR	AT4G15080	2.00E-116	DHHC-type zinc finger family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000114	1641174	1649398	+

Transcript Sequence
>GWHTAAEX001410 ATTTAAAACTGCTGTCCGGAAGCTCATCAGCCTCTCTCTCGCTTTGCGTAGAACGCTTCGGGATTGAGAAGTGGAATAGAGAGCCTGTGCGCTGATTCGCGTTTCGGAGCAAGAAAAGGAGGGAAATTGTTCAGTTTCTTGAAACGGAGGAAGCCATAGTCTTTCTTCATTAGTATGCCATCTTTGTTCGCTGCCGTTTCGAGCAGCTGAGCTCTGTTTTCGACAGAACAGTATCGATTTTATGGCCAGGAGCCATGGATGGCAATTGCCCGCTCACACTCTCCAGGTGGTGGCAACAACCTTTTTTTTCTTTCTCTCTATTGCTTTCTATGCCTTCTTTGCTCCATTCTTGGGAAATCGACTCTATGAATTTGTTGCAATGACTGTTTATAGCATATTTGCTTTTTTTGTGATTATCCTTTATGTTAGATGCGCTGCCATTAATCCTGCTGATTCTGGAGTCCTGGTTCCTAATGACGCAAAATCAGCTAGTAAATCACAATTGGATATGGGTTCTGGAACACCAAATCAAATCTGTTTGAACCCCGAGCAGAAAATAGGGAAGGAAAAAACGACTGCTGGCTCAGATGTTTGTTGTACCTTATGCAGTATTATGGCCAAAGAAGATTGTCGCAACAATCTTGACAGCACACATCAGGATGAGGGGCCTTTTTGTACAGTATGCAATGCTGAGGTCGGTAAGTTGAGCAAGCATTGCCGCAGCTGTGACAAATGCGTAGATGGATTTGATCATCATTGTCGTTGGTTGAACAATTGCATCGGGCGTAAGAACTATGTTACTTTTTTGTTTCTCATGGCATCAGCCCTTGCATGGGCTGCTGTTCATTGTGGTGTGGGCATTGCTGTCCTTGTGCGATGTTTTCTGCATAAAGGGGCAATTCGAATCGAGGTCATTGACAGGGTGGGTGATGTTTTTTACAGGGTTCCTTTTACTGTTATTGTGTCTATATGTACAGCGGTTGCCTTAATAGCAATGGCCGCTCTAGGAGAGCTCTTTTTCTTCCACATGATACTTGTCAAAAAGGGTATCACAACTTACGATTATATTGTAGCAATGAGAACCCAAAGTGAACCACCCGCAAACGAACACCAATCTTTCCCATCCTCACCCTTCACTTCCCCACCAACAGTCATTAGGCACAGTTCTTTTGGCTTGCAGTATAAAGAGTCATGGTGCGCTGCCCATCGAGTCACCATAAACAATCCGGATGAAATATTTTCACGCATAGAACAAAGCAGCATTCCTTCAAATGCAATTACTGCTGATCCCGAACCATCGGATTCGGTCAAACAGGGGCCTAGACAAACAGTCCGCACAAGTCCCTGGAAGCTCGCGAAACTAAATTCAAATGAAGCCATGAGGGCTGCAGCCAAAGCCAGAGCATCTTCTACAGTTCTGAGAGCAAACAACATCTTCAATTTGCATGATGGGACTCCCAGGAGAGCCGGTAGGGGAGACCAAGAAACTCGCCCAAATGCTCCAATGATACTCAGCAGCCCTCTTGCCGAGGTTGCGCAGCAGCATTTCAACCCGATGTTTGAATCGTCGATGAGACAGGCTCAGCGGTCAGCCATAGCCAGTGATGGGGAAGAGAGTATGGCTAAAGCGAGTGTTGAGCACAAATTGCCCACGCACTCATTGGTGCATTGGGATCAAGAAGCGGTGAAGTTTGTTTCAACGCAGCGGAACATTGTTGGATCTTCTTCGAGGTCGAATGAAAGAATGGGTCCTATTATTGGTAATCTTTTGTTAGAGCAGCAGCAAAGGGTTGGAATTGGGAGGGGATCAAAAAAAAAAAACTTCTCTTCAGCTATACCTGTGTTTGATATCAGGTAGTTTAAGACAGCTGAGCAAGTAGCTTTTGATTTTATTATCAGGAGTGGTGTTTCCAGATTAACGTTTTATGGTGATATTTTAGTATAGTTTCATGGTTAGCTTTTATCAGAAATCTTTTCTTTCTATTCTGCTCAACCCTTTAACAGTAAATCCTGTGCTTTCAGATTTAATAATATTTGAAAGGACTAAAACCAGAGAAAGCTGTGTGAATACACATTTCTAAAACGCTGTAAATCC

Network for GWHGAAEX001410

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module8

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01529.19	DHHC	140	276	6.10E-30

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0016409	Molecular Function	palmitoyltransferase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	32.630
SRP064423	SRR2545915	Juvenile tuber	4.260
SRP108465	SRR5643513	five period of Gastrodia elata	4.600
	SRR5643514	five period of Gastrodia elata	5.380
	SRR5643515	five period of Gastrodia elata	3.730
	SRR5643524	five period of Gastrodia elata	4.500
	SRR5643525	five period of Gastrodia elata	2.650
	SRR5643528	five period of Gastrodia elata	1.090
	SRR5643658	five period of Gastrodia elata	2.610
	SRR5643659	five period of Gastrodia elata	1.780
	SRR5643660	five period of Gastrodia elata	4.330
	SRR5643661	five period of Gastrodia elata	1.260
	SRR5643662	five period of Gastrodia elata	5.180
	SRR5643663	five period of Gastrodia elata	2.600
	SRR5643664	five period of Gastrodia elata	4.880
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	3.140
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	5.000
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	3.250
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	3.330
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	3.690
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	5.700
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	2.780
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	2.880
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	5.490
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	5.730
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	3.990
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	3.990
SRP279888	Gastro	Gastrodia elata tuber	2.24
	Juven	Juvenile tuber	2.80
	Mother_Gastro	Mother tuber of Gastrodia elata	9.54
	Mother_Juven	Mother tuber of Juvenile	4.38