Detail information of GWHGAAEX001440/evm.TU.scaffold_109.94


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|337285964|ref|YP_004625437.1|2.00E-126alpha,alpha-trehalose-phosphate synthase [Thermodesulfatator indicus DSM 15286]
KOGKOG10500Trehalose-6-phosphate synthase component TPS1 and related subunits
nrgi|672131403|ref|XP_008789260.1|0PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6-like isoform X1 [Phoenix dactylifera]
Swissprottr|Q94AH8|TPS6_ARATH0Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6
trEMBLtr|A0A067L222|A0A067L222_JATCU0Uncharacterized protein {ECO:0000313|EMBL:KDP38139.1}
TAIRAT1G680200UDP-Glycosyltransferase / trehalose-phosphatase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011433210793324339-
Transcript Sequence

Network for GWHGAAEX001440

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00982.20Glyco_transf_20625514.00E-180
PF02358.15Trehalose_PPase6018352.60E-71
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K16055TPS Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Starch and sucrose metabolismmap00500

Gene Ontology

GO term OntologyName
GO:0005992Biological Processtrehalose biosynthetic process
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms64.600
SRR2545915Juvenile tuber87.840
SRP108465SRR5643513five period of Gastrodia elata32.090
SRR5643514five period of Gastrodia elata23.420
SRR5643515five period of Gastrodia elata24.050
SRR5643524five period of Gastrodia elata30.700
SRR5643525five period of Gastrodia elata42.630
SRR5643528five period of Gastrodia elata42.780
SRR5643658five period of Gastrodia elata54.920
SRR5643659five period of Gastrodia elata19.400
SRR5643660five period of Gastrodia elata43.100
SRR5643661five period of Gastrodia elata21.290
SRR5643662five period of Gastrodia elata29.380
SRR5643663five period of Gastrodia elata17.200
SRR5643664five period of Gastrodia elata43.730
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_128.980
SRR6049655Rhizomagastrodiae_C368-T10_good_127.080
SRR6049656Rhizomagastrodiae_C368-T07_good_124.670
SRR6049657Rhizomagastrodiae_C368-T07_good_143.100
SRR6049658Rhizomagastrodiae_C368-T04_good_137.640
SRR6049659Rhizomagastrodiae_C368-T04_good_148.020
SRR6049660Rhizomagastrodiae_C368-T01_good_124.830
SRR6049661Rhizomagastrodiae_C368-T04_good_137.450
SRR6049662Rhizomagastrodiae_C368-T01_good_110.320
SRR6049663Rhizomagastrodiae_C368-T01_good_19.830
SRR6049664Rhizomagastrodiae_C368-T10_good_113.870
SRR6049665Rhizomagastrodiae_C368-T10_good_113.870
SRP279888GastroGastrodia elata tuber 41.69
JuvenJuvenile tuber15.61
Mother_GastroMother tuber of Gastrodia elata 21.98
Mother_JuvenMother tuber of Juvenile 35.15