Detail information of GWHGAAEX001442/evm.TU.scaffold_109.97


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|209964544|ref|YP_002297459.1|0NADH dehydrogenase subunit G [Rhodospirillum centenum SW]
KOGKOG22820NADH-ubiquinone oxidoreductase, NDUFS1/75 kDa subunit
nrgi|743800739|ref|XP_010926097.1|0PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial-like [Elaeis guineensis]
Swissprottr|Q43644|NDUS1_SOLTU0NADH dehydrogenase [ubiquinone] iron-sulfur protein 1, mitochondrial (Precursor)
trEMBLtr|F6HSN0|F6HSN0_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB57671.1}
TAIRAT5G375100NADH-ubiquinone dehydrogenase, mitochondrial, putative

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000011433821143410779-
Transcript Sequence

Network for GWHGAAEX001442

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13510.5Fer2_4661424.80E-17
PF10588.8NADH-G_4Fe-4S_31491861.20E-15
PF00384.21Molybdopterin3376553.90E-69
PF09326.10NADH_dhqG_C7007311.30E-11
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03934NDUFS1 Metabolic pathways map01100
Oxidative phosphorylationmap00190
Retrograde endocannabinoid signalingmap04723
Thermogenesismap04714

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0042773Biological ProcessATP synthesis coupled electron transport
GO:0051536Molecular Functioniron-sulfur cluster binding
GO:0016651Molecular Functionoxidoreductase activity, acting on NAD(P)H
GO:0008137Molecular FunctionNADH dehydrogenase (ubiquinone) activity
GO:0009055Molecular Functionelectron carrier activity
GO:0016491Molecular Functionoxidoreductase activity
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms135.790
SRR2545915Juvenile tuber96.020
SRP108465SRR5643513five period of Gastrodia elata75.330
SRR5643514five period of Gastrodia elata96.980
SRR5643515five period of Gastrodia elata77.480
SRR5643524five period of Gastrodia elata89.990
SRR5643525five period of Gastrodia elata85.580
SRR5643528five period of Gastrodia elata102.080
SRR5643658five period of Gastrodia elata92.470
SRR5643659five period of Gastrodia elata76.340
SRR5643660five period of Gastrodia elata84.850
SRR5643661five period of Gastrodia elata77.650
SRR5643662five period of Gastrodia elata81.350
SRR5643663five period of Gastrodia elata78.130
SRR5643664five period of Gastrodia elata86.340
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1108.670
SRR6049655Rhizomagastrodiae_C368-T10_good_1107.540
SRR6049656Rhizomagastrodiae_C368-T07_good_1106.770
SRR6049657Rhizomagastrodiae_C368-T07_good_1108.450
SRR6049658Rhizomagastrodiae_C368-T04_good_1112.950
SRR6049659Rhizomagastrodiae_C368-T04_good_1122.290
SRR6049660Rhizomagastrodiae_C368-T01_good_199.320
SRR6049661Rhizomagastrodiae_C368-T04_good_1107.410
SRR6049662Rhizomagastrodiae_C368-T01_good_1115.690
SRR6049663Rhizomagastrodiae_C368-T01_good_1109.710
SRR6049664Rhizomagastrodiae_C368-T10_good_1125.990
SRR6049665Rhizomagastrodiae_C368-T10_good_1125.990
SRP279888GastroGastrodia elata tuber 74.52
JuvenJuvenile tuber73.26
Mother_GastroMother tuber of Gastrodia elata 53.06
Mother_JuvenMother tuber of Juvenile 60.29