Gene detail

Detail information of GWHGAAEX001447/evm.TU.scaffold_109.103

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG2365	1.00E-180	Uncharacterized membrane protein
nr	gi\|225452324\|ref\|XP_002272633.1\|	0	PREDICTED: transmembrane protein 245-like [Vitis vinifera]
trEMBL	tr\|F6HUU5\|F6HUU5_VITVI	0	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB58463.1}
TAIR	AT5G55960	1.00E-180	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000114	3556749	3564794	-

Transcript Sequence
>GWHTAAEX001447 CCGCCAATTCTTCGTTCATCAACCATATGCAAATAGAACCGATCAAAACCTTCAAAAGCAGAATTGCAGCTGCTGCGATAGGGTTCCAATGGCTGCAAACTTTGGCGAAGAACATCAGACAAATCCACCGCCGGATGATAATAATACTAACGATGACGGCGACAATGCTGCCAACAACGCGGGATCGGACCGCCGGAAGGGAGTTTTGTTAAGGGAGGAAGGAATGCGCCTCGCCATCTACATTGCGATGGCGCACGGCGGGTTAGCACTACTGTTTGCCCTAATATACGGGCTATCACGTCTGTTGCAGGACTACAGGCGGCCAATCCAGTGGGCATTGCTCTGCTCGATGCCTCTTCGAGAGCTCCACACCACCATCGTCTCCTTTTGGTCCCACCCGCTCAGCTTAGGGCTCCCTGAGACCCTCATCGCCGTCCCCCTCGCTATCCTCCGCTCTGCCGCAAGCGCTCTCATCGACTCTCACGCCGCTCTCCACCGCCTCCTTCGCTGCCAGATCCCGCAGCAACGCCAATCGCCTCGCCTCGGCTTCTCAAACCTCATGCGATGGCTACTCTCCTTCGCCCTCTTCGTCCTCCTCTACGAGCGCTTTGGCCCTTTCGCTTTCCCCTTTTTCGTCTTACCCGGCTTCTTCGCTTCTGCCCGACCACGCCCTCTCCCTCTCACTGCCACCCTTTCCGCCTTCTCCTCCGCCCGGCACAGCCGAAAGCAATCCTCAAGCGATCCATCTCCGCCGCGCGCCATCAGAGGCACCCTCACCTCCCTCATCCATCGCCGCCTCAACACTCTCGTCGCCGTTAATCTGATCCTAGCCCTGATCGTTGCCTCGCTCACCGGATCCCTCCTTTTCTCTTACAAGATCACCATCGAGGGACGCGGCGCTGTCTCCGCCCTCAAAACTCACTTCCAAGAACACAATTACACGGAAAGGATCGGCCTCCAGCGATGGATGGACGAACACGATGTTCCCGAGCTAATCGAGTCTAGCGCATCCAAGCTATACCGTAGCGCCGTCCGCTACGTCGATTCTCTTGCCCTCCAGTACAATGCCACCGATCTCGCCAACGGATTCAAGCTCTACCTCATCAAACCCTTGGAAGAATCCTTCAACTCCTCATCCTTCACAGCAAAGAAATCCTCCTCCCTCCACCCCCTGTCCATGAATATCCACAACCTTGTCCACCATGTCGGCAACCGGAACTGGAGGCAAACGTATGCGAACTTGGATTCCACGGTGAAGGAATTCCTCTCTGTGATTGCCAGAGACGATTTGCTGGAGAGCATCAAAGCTTTTGCCCTTCAGAGCATTGATATCTCCCAGAAGGTCCTGGCTAGCGGTTCCCTGGTTTTTTATGGGAGCGCCAATTTGCTCCTCTCAATTTCTCTCTCGATAGTCTCCGGTGCTGCCGGATTGCTGAATTTTGTTTCGCAGATTTTCATTTTCTTTTGGCTTCTCTACTCTCTAATAACTTCGGAATCAGGTGTCATGGATCATGTTCTTGGCATGCTTCCGATTTCTAAGTCTAAAAGGGTTCGTTGTGCTGTGGTTCTTGACCATGCTGTTAGTAGTGTGATGCTAGCTGCTGTAAAGATAGCTTTGTTTCAGGGGTGCTTCACATATCTCTTGTTTCGATTTTACCATATACATTTTCTTTATGCATCAACTTTCATTGCCTGTATGAGCGCTATCCTGCCGATTGCACCATTCTGGCTTTCATCCCTTCCCGCAGCAGTTCAGTTGGCTGTGGAAGGCAGATATGCTGAAACTGTGGTGCTCACATCAATTCATCTCTTTGTTTTGGATTATGGGACTCTTGCAATACAGAATGAAATACCAGGGCAGAATGCTTACTTGACTGGGCTTAGCATCCTCGGTGGAATGGCATTATTCCCATCTGTTCTGGAGGGTGCGATCATGGGACCTTTGCTGCTGACTGTGATGATTGCTGTGAAAAATCTTTATGCAGAATTTGTTCTTGGATCTTCCAAGAACAGCACTGACTAATCCCTCCTTCCCTTTTCTCTTCCTCTTTTACCTAAAGAGGCAACCCCTGCTTGATTGATTTGTAGGAAATGAAAAATAAAAAAAAGAAAAAGGATTAGAATTAGTTTTCGCCTTTTGATTGTTCATTCATTCTTTTATTTATCCTTAGCTTGATTTCTCCCAAATTATCATGCTGGAATATTCAAGAAACTATGATCATATATTGCAAATACTGCTTTTTATAAACTGGCAAATATATATGTATACAATTTTTGTATCTATGTTGTTTTTTTCTCGAATTTTGGGAGTACGATTGTGGATGTCGTCATGGCATGTTGCTTACCCTCATTTAGTATTTAAATCAAAGCTTTATTTAGCATCTGATTACACAAAAATATATATCAAAAA

Network for GWHGAAEX001447

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	0.310
SRP064423	SRR2545915	Juvenile tuber	0.180
SRP108465	SRR5643513	five period of Gastrodia elata	0.830
	SRR5643514	five period of Gastrodia elata	0.910
	SRR5643515	five period of Gastrodia elata	1.190
	SRR5643524	five period of Gastrodia elata	0.640
	SRR5643525	five period of Gastrodia elata	1.650
	SRR5643528	five period of Gastrodia elata	1.550
	SRR5643658	five period of Gastrodia elata	1.290
	SRR5643659	five period of Gastrodia elata	1.230
	SRR5643660	five period of Gastrodia elata	0.800
	SRR5643661	five period of Gastrodia elata	1.050
	SRR5643662	five period of Gastrodia elata	0.430
	SRR5643663	five period of Gastrodia elata	0.370
	SRR5643664	five period of Gastrodia elata	0.480
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	0.810
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	1.000
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	1.410
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	0.760
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	0.550
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	0.590
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	0.850
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	1.100
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	1.740
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	1.310
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	1.350
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	1.350
SRP279888	Gastro	Gastrodia elata tuber	0.37
	Juven	Juvenile tuber	0.53
	Mother_Gastro	Mother tuber of Gastrodia elata	1.05
	Mother_Juven	Mother tuber of Juvenile	0.52