Detail information of GWHGAAEX001453/evm.TU.scaffold_11.13


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672175834|ref|XP_008807983.1|1.22E-95PREDICTED: muscle M-line assembly protein unc-89-like [Phoenix dactylifera]
trEMBLtr|M0TBQ5|M0TBQ5_MUSAM3.00E-90Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P31100_001}
TAIRAT2G227206.00E-17SPT2 chromatin protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000013203913239436+
Transcript Sequence

Network for GWHGAAEX001453

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08243.10SPT23544513.10E-18
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms37.240
SRR2545915Juvenile tuber26.840
SRP108465SRR5643513five period of Gastrodia elata16.810
SRR5643514five period of Gastrodia elata14.380
SRR5643515five period of Gastrodia elata15.670
SRR5643524five period of Gastrodia elata14.320
SRR5643525five period of Gastrodia elata22.050
SRR5643528five period of Gastrodia elata17.380
SRR5643658five period of Gastrodia elata18.740
SRR5643659five period of Gastrodia elata22.840
SRR5643660five period of Gastrodia elata22.880
SRR5643661five period of Gastrodia elata21.110
SRR5643662five period of Gastrodia elata21.490
SRR5643663five period of Gastrodia elata22.530
SRR5643664five period of Gastrodia elata25.630
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_122.120
SRR6049655Rhizomagastrodiae_C368-T10_good_124.640
SRR6049656Rhizomagastrodiae_C368-T07_good_119.180
SRR6049657Rhizomagastrodiae_C368-T07_good_124.470
SRR6049658Rhizomagastrodiae_C368-T04_good_126.010
SRR6049659Rhizomagastrodiae_C368-T04_good_129.500
SRR6049660Rhizomagastrodiae_C368-T01_good_122.880
SRR6049661Rhizomagastrodiae_C368-T04_good_121.300
SRR6049662Rhizomagastrodiae_C368-T01_good_116.970
SRR6049663Rhizomagastrodiae_C368-T01_good_117.740
SRR6049664Rhizomagastrodiae_C368-T10_good_118.640
SRR6049665Rhizomagastrodiae_C368-T10_good_118.640
SRP279888GastroGastrodia elata tuber 24.20
JuvenJuvenile tuber23.73
Mother_GastroMother tuber of Gastrodia elata 16.01
Mother_JuvenMother tuber of Juvenile 20.59