Detail information of GWHGAAEX001457/evm.TU.scaffold_11.18
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|302035575|ref|YP_003795897.1| | 1.00E-45 | cytochrome P450 [Candidatus Nitrospira defluvii] |
| KOG | KOG0157 | 0 | Cytochrome P450 CYP4/CYP19/CYP26 subfamilies |
| nr | gi|695004257|ref|XP_009388531.1| | 0 | PREDICTED: cytochrome P450 734A6-like [Musa acuminata subsp. malaccensis] |
| Swissprot | tr|B9X287|C7346_ORYSJ | 0 | Cytochrome P450 734A6 |
| trEMBL | tr|A0A096SAT2|A0A096SAT2_MAIZE | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GRMZM2G138750_P01} |
| TAIR | AT2G26710 | 0 | Cytochrome P450 superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000013 | 554084 | 556496 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX001457
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00067.21 | p450 | 80 | 473 | 3.20E-80 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Cytochrome P450 Family | CYP72B1 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K15639 | CYP734A1, BAS1 | Brassinosteroid biosynthesis | map00905 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0020037 | Molecular Function | heme binding |
| GO:0016705 | Molecular Function | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
| GO:0005506 | Molecular Function | iron ion binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 3.820 |
| SRR2545915 | Juvenile tuber | 1.620 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 5.800 |
| SRR5643514 | five period of Gastrodia elata | 6.350 | |
| SRR5643515 | five period of Gastrodia elata | 8.600 | |
| SRR5643524 | five period of Gastrodia elata | 10.220 | |
| SRR5643525 | five period of Gastrodia elata | 0.280 | |
| SRR5643528 | five period of Gastrodia elata | 0.510 | |
| SRR5643658 | five period of Gastrodia elata | 0.580 | |
| SRR5643659 | five period of Gastrodia elata | 3.740 | |
| SRR5643660 | five period of Gastrodia elata | 3.240 | |
| SRR5643661 | five period of Gastrodia elata | 4.260 | |
| SRR5643662 | five period of Gastrodia elata | 3.570 | |
| SRR5643663 | five period of Gastrodia elata | 1.820 | |
| SRR5643664 | five period of Gastrodia elata | 5.280 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 10.780 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 11.160 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 9.590 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 6.600 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 5.840 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 7.310 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 9.370 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 5.460 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 5.950 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 10.820 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 11.160 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 11.160 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 1.56 |
| Juven | Juvenile tuber | 3.71 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 24.23 | |
| Mother_Juven | Mother tuber of Juvenile | 7.51 |