Detail information of GWHGAAEX001459/evm.TU.scaffold_11.20


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG31148.00E-152Uncharacterized conserved protein
nrgi|672132154|ref|XP_008789655.1|6.36E-165PREDICTED: protein YIPF1 homolog [Phoenix dactylifera]
trEMBLtr|M0TX01|M0TX01_MUSAM1.00E-157Protein YIPF {ECO:0000256|RuleBase:RU361264}
TAIRAT5G274908.00E-152Integral membrane Yip1 family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000013731339743037+
Transcript Sequence

Network for GWHGAAEX001459

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04893.16Yip1942431.70E-12
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms41.260
SRR2545915Juvenile tuber47.050
SRP108465SRR5643513five period of Gastrodia elata71.120
SRR5643514five period of Gastrodia elata73.620
SRR5643515five period of Gastrodia elata77.060
SRR5643524five period of Gastrodia elata77.230
SRR5643525five period of Gastrodia elata105.020
SRR5643528five period of Gastrodia elata114.230
SRR5643658five period of Gastrodia elata121.120
SRR5643659five period of Gastrodia elata66.270
SRR5643660five period of Gastrodia elata59.090
SRR5643661five period of Gastrodia elata71.770
SRR5643662five period of Gastrodia elata67.860
SRR5643663five period of Gastrodia elata62.780
SRR5643664five period of Gastrodia elata67.220
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_148.860
SRR6049655Rhizomagastrodiae_C368-T10_good_166.440
SRR6049656Rhizomagastrodiae_C368-T07_good_159.150
SRR6049657Rhizomagastrodiae_C368-T07_good_155.060
SRR6049658Rhizomagastrodiae_C368-T04_good_154.130
SRR6049659Rhizomagastrodiae_C368-T04_good_153.450
SRR6049660Rhizomagastrodiae_C368-T01_good_156.730
SRR6049661Rhizomagastrodiae_C368-T04_good_151.120
SRR6049662Rhizomagastrodiae_C368-T01_good_152.750
SRR6049663Rhizomagastrodiae_C368-T01_good_149.910
SRR6049664Rhizomagastrodiae_C368-T10_good_172.650
SRR6049665Rhizomagastrodiae_C368-T10_good_172.650
SRP279888GastroGastrodia elata tuber 53.69
JuvenJuvenile tuber63.77
Mother_GastroMother tuber of Gastrodia elata 93.22
Mother_JuvenMother tuber of Juvenile 102.80