Detail information of GWHGAAEX001474/evm.TU.scaffold_11.42
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|427736030|ref|YP_007055574.1| | 5.00E-48 | cytochrome P450 [Rivularia sp. PCC 7116] |
| KOG | KOG0157 | 3.00E-80 | Cytochrome P450 CYP4/CYP19/CYP26 subfamilies |
| nr | gi|743758313|ref|XP_010926147.1| | 0 | PREDICTED: ent-kaurenoic acid oxidase 2-like [Elaeis guineensis] |
| Swissprot | tr|B5BSX1|BAMO_GLYUR | 2.00E-84 | Beta-amyrin 11-oxidase |
| trEMBL | tr|W1NHG3|W1NHG3_AMBTC | 2.00E-169 | Uncharacterized protein {ECO:0000313|EMBL:ERM94634.1} |
| TAIR | AT2G32440 | 3.00E-80 | ent-kaurenoic acid hydroxylase 2 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000013 | 2014931 | 2024393 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX001474
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00067.21 | p450 | 42 | 470 | 6.70E-53 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Cytochrome P450 Family | CYP88A4 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0005506 | Molecular Function | iron ion binding |
| GO:0016705 | Molecular Function | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
| GO:0020037 | Molecular Function | heme binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 2.390 |
| SRR2545915 | Juvenile tuber | 1.060 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 1.620 |
| SRR5643514 | five period of Gastrodia elata | 2.680 | |
| SRR5643515 | five period of Gastrodia elata | 2.050 | |
| SRR5643524 | five period of Gastrodia elata | 2.490 | |
| SRR5643525 | five period of Gastrodia elata | 3.360 | |
| SRR5643528 | five period of Gastrodia elata | 2.450 | |
| SRR5643658 | five period of Gastrodia elata | 2.110 | |
| SRR5643659 | five period of Gastrodia elata | 3.920 | |
| SRR5643660 | five period of Gastrodia elata | 3.040 | |
| SRR5643661 | five period of Gastrodia elata | 3.770 | |
| SRR5643662 | five period of Gastrodia elata | 3.500 | |
| SRR5643663 | five period of Gastrodia elata | 2.950 | |
| SRR5643664 | five period of Gastrodia elata | 2.340 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 2.750 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 2.530 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 2.230 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 2.720 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 4.130 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 2.690 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 3.050 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 4.220 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 3.040 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 3.270 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 3.030 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 3.030 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 4.22 |
| Juven | Juvenile tuber | 4.62 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 2.89 | |
| Mother_Juven | Mother tuber of Juvenile | 3.23 |