Detail information of GWHGAAEX001476/evm.TU.scaffold_11.44


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|269839716|ref|YP_003324408.1|5.00E-71glycoside hydrolase family protein [Thermobaculum terrenum ATCC BAA-798]
nrgi|672152869|ref|XP_008797528.1|0PREDICTED: LOW QUALITY PROTEIN: mannan endo-1,4-beta-mannosidase 1-like [Phoenix dactylifera]
Swissprottr|Q0JKM9|MAN1_ORYSJ0Mannan endo-1,4-beta-mannosidase 1 (Precursor)
trEMBLtr|Q1EPK8|Q1EPK8_MUSAC0(1-4)-beta-mannan endohydrolase (Mannan endo-1,4-beta-mannosidase), putative {ECO:0000313|EMBL:ABF69949.1}
TAIRAT5G664600Glycosyl hydrolase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001320659462070961-
Transcript Sequence

Network for GWHGAAEX001476

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00150.17Cellulase643251.60E-13
Protein Sequence

Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH5

KEGG pathway

KO Enzyme pathway mapID
K19355MAN Metabolic pathways map01100
Fructose and mannose metabolismmap00051

Gene Ontology

GO term OntologyName
GO:0005975Biological Processcarbohydrate metabolic process
GO:0004553Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compounds

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms32.900
SRR2545915Juvenile tuber57.310
SRP108465SRR5643513five period of Gastrodia elata31.780
SRR5643514five period of Gastrodia elata30.750
SRR5643515five period of Gastrodia elata24.420
SRR5643524five period of Gastrodia elata30.500
SRR5643525five period of Gastrodia elata52.870
SRR5643528five period of Gastrodia elata58.810
SRR5643658five period of Gastrodia elata99.530
SRR5643659five period of Gastrodia elata28.030
SRR5643660five period of Gastrodia elata22.470
SRR5643661five period of Gastrodia elata29.630
SRR5643662five period of Gastrodia elata17.100
SRR5643663five period of Gastrodia elata26.610
SRR5643664five period of Gastrodia elata16.250
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_122.900
SRR6049655Rhizomagastrodiae_C368-T10_good_119.010
SRR6049656Rhizomagastrodiae_C368-T07_good_129.560
SRR6049657Rhizomagastrodiae_C368-T07_good_125.130
SRR6049658Rhizomagastrodiae_C368-T04_good_135.460
SRR6049659Rhizomagastrodiae_C368-T04_good_134.450
SRR6049660Rhizomagastrodiae_C368-T01_good_121.300
SRR6049661Rhizomagastrodiae_C368-T04_good_130.780
SRR6049662Rhizomagastrodiae_C368-T01_good_123.290
SRR6049663Rhizomagastrodiae_C368-T01_good_119.870
SRR6049664Rhizomagastrodiae_C368-T10_good_125.750
SRR6049665Rhizomagastrodiae_C368-T10_good_125.750
SRP279888GastroGastrodia elata tuber 15.57
JuvenJuvenile tuber23.42
Mother_GastroMother tuber of Gastrodia elata 23.04
Mother_JuvenMother tuber of Juvenile 18.23