Detail information of GWHGAAEX001500/evm.TU.scaffold_11.77


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672164224|ref|XP_008801981.1|2.29E-144PREDICTED: transmembrane protein 33 homolog [Phoenix dactylifera]
trEMBLtr|B8ABI3|B8ABI3_ORYSI4.00E-140Putative uncharacterized protein {ECO:0000313|EMBL:EEC71042.1}
TAIRAT3G024205.00E-125Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001333439693378558-
Transcript Sequence

Network for GWHGAAEX001500

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03661.12UPF01211193181.10E-11
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms58.400
SRR2545915Juvenile tuber102.470
SRP108465SRR5643513five period of Gastrodia elata69.920
SRR5643514five period of Gastrodia elata73.320
SRR5643515five period of Gastrodia elata69.480
SRR5643524five period of Gastrodia elata78.590
SRR5643525five period of Gastrodia elata40.460
SRR5643528five period of Gastrodia elata33.220
SRR5643658five period of Gastrodia elata33.500
SRR5643659five period of Gastrodia elata74.960
SRR5643660five period of Gastrodia elata81.790
SRR5643661five period of Gastrodia elata84.640
SRR5643662five period of Gastrodia elata69.050
SRR5643663five period of Gastrodia elata63.160
SRR5643664five period of Gastrodia elata68.860
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_174.160
SRR6049655Rhizomagastrodiae_C368-T10_good_199.760
SRR6049656Rhizomagastrodiae_C368-T07_good_171.500
SRR6049657Rhizomagastrodiae_C368-T07_good_171.740
SRR6049658Rhizomagastrodiae_C368-T04_good_169.570
SRR6049659Rhizomagastrodiae_C368-T04_good_172.450
SRR6049660Rhizomagastrodiae_C368-T01_good_167.280
SRR6049661Rhizomagastrodiae_C368-T04_good_171.680
SRR6049662Rhizomagastrodiae_C368-T01_good_168.470
SRR6049663Rhizomagastrodiae_C368-T01_good_167.350
SRR6049664Rhizomagastrodiae_C368-T10_good_176.710
SRR6049665Rhizomagastrodiae_C368-T10_good_176.710
SRP279888GastroGastrodia elata tuber 78.08
JuvenJuvenile tuber115.64
Mother_GastroMother tuber of Gastrodia elata 55.84
Mother_JuvenMother tuber of Juvenile 89.20