Detail information of GWHGAAEX001507/evm.TU.scaffold_11.93


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|16799697|ref|NP_469965.1|3.00E-57hypothetical protein lin0622 [Listeria innocua Clip11262]
KOGKOG11987.00E-154Zinc-binding oxidoreductase
nrgi|743758187|ref|XP_010925514.1|4.30E-162PREDICTED: 2-methylene-furan-3-one reductase [Elaeis guineensis]
Swissprottr|Q9ZUC1|QORL_ARATH2.00E-154Quinone oxidoreductase-like protein At1g23740, chloroplastic (Precursor)
trEMBLtr|W9RNB1|W9RNB1_9ROSA7.00E-162Quinone oxidoreductase-like protein {ECO:0000313|EMBL:EXB82596.1}
TAIRAT1G237407.00E-154Oxidoreductase, zinc-binding dehydrogenase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001340606054066777+
Transcript Sequence

Network for GWHGAAEX001507

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08240.11ADH_N391015.70E-10
PF13602.5ADH_zinc_N_22043205.80E-19
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0008270Molecular Functionzinc ion binding
GO:0016491Molecular Functionoxidoreductase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms180.170
SRR2545915Juvenile tuber214.870
SRP108465SRR5643513five period of Gastrodia elata123.110
SRR5643514five period of Gastrodia elata264.090
SRR5643515five period of Gastrodia elata156.040
SRR5643524five period of Gastrodia elata143.550
SRR5643525five period of Gastrodia elata84.300
SRR5643528five period of Gastrodia elata101.120
SRR5643658five period of Gastrodia elata85.910
SRR5643659five period of Gastrodia elata139.870
SRR5643660five period of Gastrodia elata129.430
SRR5643661five period of Gastrodia elata139.950
SRR5643662five period of Gastrodia elata175.230
SRR5643663five period of Gastrodia elata170.390
SRR5643664five period of Gastrodia elata166.560
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1121.060
SRR6049655Rhizomagastrodiae_C368-T10_good_175.590
SRR6049656Rhizomagastrodiae_C368-T07_good_1142.550
SRR6049657Rhizomagastrodiae_C368-T07_good_1127.230
SRR6049658Rhizomagastrodiae_C368-T04_good_1116.940
SRR6049659Rhizomagastrodiae_C368-T04_good_1113.660
SRR6049660Rhizomagastrodiae_C368-T01_good_1127.600
SRR6049661Rhizomagastrodiae_C368-T04_good_1129.330
SRR6049662Rhizomagastrodiae_C368-T01_good_1136.690
SRR6049663Rhizomagastrodiae_C368-T01_good_1160.920
SRR6049664Rhizomagastrodiae_C368-T10_good_1124.190
SRR6049665Rhizomagastrodiae_C368-T10_good_1124.190
SRP279888GastroGastrodia elata tuber 180.90
JuvenJuvenile tuber270.38
Mother_GastroMother tuber of Gastrodia elata 93.94
Mother_JuvenMother tuber of Juvenile 93.40