Gene detail

Detail information of GWHGAAEX001509/evm.TU.scaffold_11.96

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG4351	5.00E-34	Uncharacterized conserved protein
nr	gi\|643720766\|gb\|KDP31030.1\|	4.87E-135	hypothetical protein JCGZ_11406 [Jatropha curcas]
trEMBL	tr\|A0A067KFI8\|A0A067KFI8_JATCU	2.00E-135	Uncharacterized protein {ECO:0000313\|EMBL:KDP31030.1}
TAIR	AT4G24690_2	5.00E-34	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000013	4283240	4301473	-

Transcript Sequence
>GWHTAAEX001509 CGCATATACATCTTACATCTATAATATTTCCTTTCACTGACCTGCCTTAGAGAGGAAGAAATTGGTGGATCTATTTGACGACGATTTTTTTACAGTCTTTCTCGAGCGTATCTCACGAGCTCTCTTGGCCTCCCCGATCTGTCAATTTCGCCTATTCCATGACCTTTCGTCCAAACCATCAAAATTAGGGTTAAGTATTTCCATTTCGAACTCACAGCTCTTCGGGTACTTTTACAAGCACACGATGGCGTCATCATCCTCGTTCCTGCCACTAGTCCACAAGGAATTAATGGACGAGTGGAGCTTAGTGATAAAGGTAAAATACGGTGATATTCTCAGGCGATTCAGTTTCAACGTTAAGCAACAAGCAATGATCATTGAATATGACATGAATAAACTCAAAGAAAAAATATCAAATCTCTTCAATTTCAGCAATGATGCAACTATAGTTCTCACTTATACTGATGAAGATGGTGATGTGGTGGTTCTAGATAATGATGATGAATTGCGGGATGCTGTTTTAACCCAGATGCTAAATCCCCTGAGAATTTCTGTTCATCTAAAACCTAAATCAGCTGATGACTCTCCTTCAAATCCAACTGCTGGGGCACCTGATAATATTTCTGATACAATATCTGATACAGTGAATTACTTTTCTCATATTTCGCAGTCTGACTTTGCAACTGAATTGAATTCTGCTGTTAAAAAGTCACTGAAATCTGTTCCTGATCCAATTCGTGAGGTTCTCTCAAATTTTTCGCGCGAAGTGATGCTAACTGCATCGACGGCTCCTGTTTTGAGTGATCTTTTGTCGCTGTTGTCCAAGCGGGAACATACAAATGTCTCACAATCTCATCATGAAACTATTAATAAGCCGGAAGACACATGTTGTGGTTATCCTTCTTGTGCTGCCGACATCAATGCTTGTGATGCTTCCCATGCTTCAAACAGCCAACCTAATCAATCACCTTCTGTTTTGCCTCAGACTAACTTTGTCAATCAGTCTCCTGAAAATAATCAAAAGATGCATGAAACTGGTTATCCTAGCCGGCAAATGGCATCCATAAACCATTCTTTTTTTGATTTTGATCACAAGATGAGCAAAAAGAGGGAAATCTGTGAACTTTGCACTGATGGAAAATTAGCATGTCCTAATGCAATGCACTCCTTCCCGTCAAAAGGTTGTTCCTATTTTCAGGATGGGGGCTTTGGAAGCAAGCACTGTGCTCCAACTTCGTGTTCCTGCCAGCCCACGATGCTACCTCCTTACAGGAGGCTTTCATCAAGTTTCCATGATCGTACTTCCCGAACATTCCATAAAGGTGTCATATGTGATGGCTGTGGGATGCACCCTATTATTGGACCAAGATACAAGTCTACTGTTAAAGAAAATTTTGATTTATGTGGCATGTGTTTCCAACATATGGGCAAGGAGGCTGAGTATACCAGAATTGATTGGTCTGCCTTTCGTTTTCCCAGTCCAAAGAAAGATCACAGATATAAGTATAGAAACCAGTTTCTTTTGCCGTTGGACTCCCATATTGGCATAAAAGTACCTAAGCCAAAGCTTGGGAGCTGCTTTATTCGAGATGTGACGGTTTGGGATGGAACCGTGATGCGCCCTTCTTCTCGATTCACTAAGATATGGAGGATGCACAACAATGGTACAATTGCGTGGCCTCGTGGCACCCAACTTGTGCGGGTTAGAGGCCATGACTTGGGTGGCCGTGACTTTGCAGACTTGGAGATATCCGAGATGGGATTTCCTGTGGATGATGAACTTGATATTGCAGTCGATTTTGTTGCACCACTTATACCGGGTGAATACATCTCATACTGGCAGATGGCTTCACCATTTGGGCAAAAGTTTGGAGATAAAGTTTGGGTCATTATCCAGGTTAATGAACGGCCATCGCCTTGTGCTTCTTGTGCTGCCCCTGCATTTCTCAACTTGAACTTGCCCCCTGAAAATAACCCCCAGGGTGACCCAATTATCATGCATGCCAACTCTGAGCCCTTGGATCACACTCCTGTCAAACCAGATGAAACCAAAGTATCCGTTGATCTTGACATGTTGAATTCATCCCAAAAAGATGGTGCCTGCGATGATCTCACTTCTTCTCCTTTAAAGGATTCTCCGGTGACCCTTATTGATATTCCGATATCCTCACTCCCAATCTCAAATCCAATCATTGACACTCGAGAATCATCCCCTCCCTTGATTCTGATTCAACCGGATGTCGATATGCTGAAGTCCATACTGCAGGAAGGCACCTCTGTTCCAAAGGCTCCGCCGGTCTCTGAGTTCTCCTCATCCATGGATTCAAATTCCTCCGGTGATATATCTGCTCATTTGCCCCCAGTTTCATATCCTCTCATTGATATCAGCAGCTCGCTGCTGGATGCTCCAACTGAAGAGAATTCGGAGGAACAAACCTTGCTGTGGGAGTTAGAAGAGATGGGCTTCAAGCTGGTTGACTTGAACAAGGAGGTCCTCAGGCGGAATCAGTATGATCTTGAGCAGTCAGTGGAGGACCTTTGTGCTTATTCTGAATGGGATCCGCTTATCAAAGAGCTGCAGGAAATGGGGTTTACTGATAGAGAGCTGAACAGGAAGCTTCTGACAAAGAATGATGGAAGTTTAAAGCGAGTTGTGATGGAGCTTATCACCGGAGAAAATGGTGAATGATTTACTGTGTGTTGATATTTTAATAATCGGAGATGATCTCTTTGCTATCCCAAATCCATGTATTTATTTTTATTATATCGAAATCCCCTATTGGCCGTCTGTTGTGCTGTTCTGTAAGTAAATATGTATTAACTTGTTTCTGATACGCCCTTTTTGCTATCCCAAATCCATGTCTTATATTCTCACGCTGTTGCAACTGTGAGCTGTTTTGTAAATAACTACATTTTTAATACTTTAATGCTTGAGTATAAGCTTCATTTTATCAAATATTAATTGAGAATAATTGTTTGCCA

Network for GWHGAAEX001509

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00564.23	PB1	48	105	5.10E-07
PF00569.16	ZZ	358	395	3.20E-11
PF16158.4	N_BRCA1_IG	451	552	1.60E-27

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K17987	NBR1	Mitophagy - animal	map04137

Gene Ontology

GO term	Ontology	Name
GO:0005515	Molecular Function	protein binding
GO:0008270	Molecular Function	zinc ion binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	114.290
SRP064423	SRR2545915	Juvenile tuber	110.830
SRP108465	SRR5643513	five period of Gastrodia elata	71.220
	SRR5643514	five period of Gastrodia elata	79.900
	SRR5643515	five period of Gastrodia elata	72.860
	SRR5643524	five period of Gastrodia elata	78.760
	SRR5643525	five period of Gastrodia elata	104.920
	SRR5643528	five period of Gastrodia elata	104.080
	SRR5643658	five period of Gastrodia elata	117.530
	SRR5643659	five period of Gastrodia elata	73.220
	SRR5643660	five period of Gastrodia elata	77.750
	SRR5643661	five period of Gastrodia elata	76.300
	SRR5643662	five period of Gastrodia elata	76.360
	SRR5643663	five period of Gastrodia elata	79.730
	SRR5643664	five period of Gastrodia elata	80.480
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	83.590
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	108.550
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	82.970
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	93.520
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	93.970
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	116.690
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	90.960
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	96.580
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	84.340
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	90.510
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	98.720
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	98.720
SRP279888	Gastro	Gastrodia elata tuber	104.77
	Juven	Juvenile tuber	110.96
	Mother_Gastro	Mother tuber of Gastrodia elata	129.74
	Mother_Juven	Mother tuber of Juvenile	157.89