Detail information of GWHGAAEX001517/evm.TU.scaffold_11.108


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672164194|ref|XP_008801965.1|4.38E-96PREDICTED: protein MIZU-KUSSEI 1 [Phoenix dactylifera]
Swissprottr|O22227|MIZ1_ARATH3.00E-65Protein MIZU-KUSSEI 1
trEMBLtr|M0SI20|M0SI20_MUSAM2.00E-90Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P26540_001}
TAIRAT3G256406.00E-71Protein of unknown function, DUF617

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001346729534674474+
Transcript Sequence

Network for GWHGAAEX001517

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04759.12DUF617952596.80E-66
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0010274Biological Processhydrotropism

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2.860
SRR2545915Juvenile tuber7.950
SRP108465SRR5643513five period of Gastrodia elata10.720
SRR5643514five period of Gastrodia elata15.860
SRR5643515five period of Gastrodia elata21.040
SRR5643524five period of Gastrodia elata19.880
SRR5643525five period of Gastrodia elata2.400
SRR5643528five period of Gastrodia elata1.250
SRR5643658five period of Gastrodia elata14.210
SRR5643659five period of Gastrodia elata11.810
SRR5643660five period of Gastrodia elata6.810
SRR5643661five period of Gastrodia elata9.090
SRR5643662five period of Gastrodia elata12.270
SRR5643663five period of Gastrodia elata10.540
SRR5643664five period of Gastrodia elata8.600
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_118.270
SRR6049655Rhizomagastrodiae_C368-T10_good_114.040
SRR6049656Rhizomagastrodiae_C368-T07_good_116.880
SRR6049657Rhizomagastrodiae_C368-T07_good_116.770
SRR6049658Rhizomagastrodiae_C368-T04_good_17.630
SRR6049659Rhizomagastrodiae_C368-T04_good_14.960
SRR6049660Rhizomagastrodiae_C368-T01_good_124.540
SRR6049661Rhizomagastrodiae_C368-T04_good_18.850
SRR6049662Rhizomagastrodiae_C368-T01_good_138.610
SRR6049663Rhizomagastrodiae_C368-T01_good_138.990
SRR6049664Rhizomagastrodiae_C368-T10_good_117.930
SRR6049665Rhizomagastrodiae_C368-T10_good_117.930
SRP279888GastroGastrodia elata tuber 12.08
JuvenJuvenile tuber35.70
Mother_GastroMother tuber of Gastrodia elata 21.02
Mother_JuvenMother tuber of Juvenile 14.61