Detail information of GWHGAAEX001518/evm.TU.scaffold_11.109


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG10737.00E-115Uncharacterized mRNA-associated protein RAP55
nrgi|695000117|ref|XP_009410329.1|0PREDICTED: protein decapping 5-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q9C658|DCP5_ARATH1.00E-120Protein decapping 5
trEMBLtr|M0S1N2|M0S1N2_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P20740_001}
TAIRAT1G261107.00E-115decapping 5

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001347345954781645+
Transcript Sequence

Network for GWHGAAEX001518

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF12701.6LSM1415874.70E-31
PF09532.9FDF4555523.10E-15
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms208.770
SRR2545915Juvenile tuber203.000
SRP108465SRR5643513five period of Gastrodia elata114.090
SRR5643514five period of Gastrodia elata110.830
SRR5643515five period of Gastrodia elata102.840
SRR5643524five period of Gastrodia elata109.670
SRR5643525five period of Gastrodia elata101.350
SRR5643528five period of Gastrodia elata94.170
SRR5643658five period of Gastrodia elata116.890
SRR5643659five period of Gastrodia elata140.510
SRR5643660five period of Gastrodia elata155.540
SRR5643661five period of Gastrodia elata130.550
SRR5643662five period of Gastrodia elata124.800
SRR5643663five period of Gastrodia elata137.880
SRR5643664five period of Gastrodia elata151.180
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1156.230
SRR6049655Rhizomagastrodiae_C368-T10_good_1197.710
SRR6049656Rhizomagastrodiae_C368-T07_good_1132.860
SRR6049657Rhizomagastrodiae_C368-T07_good_1167.240
SRR6049658Rhizomagastrodiae_C368-T04_good_1164.820
SRR6049659Rhizomagastrodiae_C368-T04_good_1183.140
SRR6049660Rhizomagastrodiae_C368-T01_good_1151.930
SRR6049661Rhizomagastrodiae_C368-T04_good_1151.680
SRR6049662Rhizomagastrodiae_C368-T01_good_1109.490
SRR6049663Rhizomagastrodiae_C368-T01_good_1125.100
SRR6049664Rhizomagastrodiae_C368-T10_good_1122.170
SRR6049665Rhizomagastrodiae_C368-T10_good_1122.170
SRP279888GastroGastrodia elata tuber 155.34
JuvenJuvenile tuber175.40
Mother_GastroMother tuber of Gastrodia elata 141.66
Mother_JuvenMother tuber of Juvenile 165.91