Detail information of GWHGAAEX001520/evm.TU.scaffold_11.112


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743774345|ref|XP_010917524.1|6.48E-32PREDICTED: protein SHOOT GRAVITROPISM 5-like [Elaeis guineensis]
Swissprottr|Q9FRH4|IDD16_ARATH4.00E-09Protein indeterminate-domain 16 {ECO:0000303|PubMed:16784536}
trEMBLtr|M0T8U0|M0T8U0_MUSAM2.00E-29Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P20920_001}
TAIRAT3G485501.00E-19Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001348530494853408-
Transcript Sequence

Network for GWHGAAEX001520

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms14.530
SRR2545915Juvenile tuber7.520
SRP108465SRR5643513five period of Gastrodia elata10.420
SRR5643514five period of Gastrodia elata22.150
SRR5643515five period of Gastrodia elata12.720
SRR5643524five period of Gastrodia elata18.060
SRR5643525five period of Gastrodia elata74.730
SRR5643528five period of Gastrodia elata21.350
SRR5643658five period of Gastrodia elata45.550
SRR5643659five period of Gastrodia elata18.900
SRR5643660five period of Gastrodia elata16.890
SRR5643661five period of Gastrodia elata16.940
SRR5643662five period of Gastrodia elata24.860
SRR5643663five period of Gastrodia elata14.950
SRR5643664five period of Gastrodia elata26.360
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_144.440
SRR6049655Rhizomagastrodiae_C368-T10_good_13.760
SRR6049656Rhizomagastrodiae_C368-T07_good_143.750
SRR6049657Rhizomagastrodiae_C368-T07_good_126.100
SRR6049658Rhizomagastrodiae_C368-T04_good_148.280
SRR6049659Rhizomagastrodiae_C368-T04_good_144.920
SRR6049660Rhizomagastrodiae_C368-T01_good_142.950
SRR6049661Rhizomagastrodiae_C368-T04_good_169.990
SRR6049662Rhizomagastrodiae_C368-T01_good_148.870
SRR6049663Rhizomagastrodiae_C368-T01_good_129.800
SRR6049664Rhizomagastrodiae_C368-T10_good_143.720
SRR6049665Rhizomagastrodiae_C368-T10_good_143.720
SRP279888GastroGastrodia elata tuber 27.96
JuvenJuvenile tuber20.65
Mother_GastroMother tuber of Gastrodia elata 56.92
Mother_JuvenMother tuber of Juvenile 28.99