Detail information of GWHGAAEX001527/evm.TU.scaffold_11.118
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|256390603|ref|YP_003112167.1| | 1.00E-25 | serine/threonine protein kinase [Catenulispora acidiphila DSM 44928] |
| KOG | KOG0660 | 0 | Mitogen-activated protein kinase |
| nr | gi|645269811|ref|XP_008240170.1| | 0 | PREDICTED: mitogen-activated protein kinase 9-like [Prunus mume] |
| Swissprot | tr|Q9LV37|MPK9_ARATH | 0 | Mitogen-activated protein kinase 9 |
| trEMBL | tr|M5WE81|M5WE81_PRUPE | 0 | Uncharacterized protein {ECO:0000313|EMBL:EMJ12082.1} |
| TAIR | AT3G18040 | 0 | MAP kinase 9 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000013 | 5193072 | 5218089 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX001527
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 25 | 316 | 2.10E-67 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | CMGC_MAPK |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K20538 | MPK8 | MAPK signaling pathway - plant | map04016 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0004707 | Molecular Function | MAP kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 20.950 |
| SRR2545915 | Juvenile tuber | 11.040 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 8.590 |
| SRR5643514 | five period of Gastrodia elata | 7.560 | |
| SRR5643515 | five period of Gastrodia elata | 6.030 | |
| SRR5643524 | five period of Gastrodia elata | 8.050 | |
| SRR5643525 | five period of Gastrodia elata | 20.650 | |
| SRR5643528 | five period of Gastrodia elata | 14.390 | |
| SRR5643658 | five period of Gastrodia elata | 12.950 | |
| SRR5643659 | five period of Gastrodia elata | 14.440 | |
| SRR5643660 | five period of Gastrodia elata | 14.130 | |
| SRR5643661 | five period of Gastrodia elata | 14.400 | |
| SRR5643662 | five period of Gastrodia elata | 13.650 | |
| SRR5643663 | five period of Gastrodia elata | 13.110 | |
| SRR5643664 | five period of Gastrodia elata | 12.740 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 13.970 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 8.990 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 13.140 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 13.550 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 14.440 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 13.180 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 13.250 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 15.260 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 16.300 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 12.610 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 10.300 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 10.300 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 16.45 |
| Juven | Juvenile tuber | 16.34 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 7.79 | |
| Mother_Juven | Mother tuber of Juvenile | 6.41 |