Detail information of GWHGAAEX001531/evm.TU.scaffold_11.123


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|83311611|ref|YP_421875.1|1.00E-18hypothetical protein amb2512 [Magnetospirillum magneticum AMB-1]
KOGKOG33639.00E-72Uncharacterized conserved nuclear protein
nrgi|672125735|ref|XP_008786293.1|5.19E-94PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Phoenix dactylifera]
trEMBLtr|M0RVX3|M0RVX3_MUSAM1.00E-85Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P00650_001}
TAIRAT2G445259.00E-72Protein of unknown function (DUF498/DUF598)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001354862295506020+
Transcript Sequence

Network for GWHGAAEX001531

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04430.13DUF498611685.70E-33
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K09008NDUFAF3 Thermogenesis map04714

Gene Ontology

GO term OntologyName
GO:0032981Biological Processmitochondrial respiratory chain complex I assembly

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms18.650
SRR2545915Juvenile tuber17.320
SRP108465SRR5643513five period of Gastrodia elata28.980
SRR5643514five period of Gastrodia elata27.000
SRR5643515five period of Gastrodia elata26.530
SRR5643524five period of Gastrodia elata27.240
SRR5643525five period of Gastrodia elata48.390
SRR5643528five period of Gastrodia elata34.280
SRR5643658five period of Gastrodia elata46.470
SRR5643659five period of Gastrodia elata31.420
SRR5643660five period of Gastrodia elata30.580
SRR5643661five period of Gastrodia elata29.290
SRR5643662five period of Gastrodia elata29.720
SRR5643663five period of Gastrodia elata31.630
SRR5643664five period of Gastrodia elata32.540
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_121.240
SRR6049655Rhizomagastrodiae_C368-T10_good_129.800
SRR6049656Rhizomagastrodiae_C368-T07_good_122.240
SRR6049657Rhizomagastrodiae_C368-T07_good_119.670
SRR6049658Rhizomagastrodiae_C368-T04_good_119.040
SRR6049659Rhizomagastrodiae_C368-T04_good_120.700
SRR6049660Rhizomagastrodiae_C368-T01_good_121.790
SRR6049661Rhizomagastrodiae_C368-T04_good_117.860
SRR6049662Rhizomagastrodiae_C368-T01_good_120.790
SRR6049663Rhizomagastrodiae_C368-T01_good_121.100
SRR6049664Rhizomagastrodiae_C368-T10_good_125.450
SRR6049665Rhizomagastrodiae_C368-T10_good_125.450
SRP279888GastroGastrodia elata tuber 22.09
JuvenJuvenile tuber23.58
Mother_GastroMother tuber of Gastrodia elata 16.69
Mother_JuvenMother tuber of Juvenile 17.26