Detail information of GWHGAAEX001541/evm.TU.scaffold_11.141


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743763903|ref|XP_010912152.1|4.77E-139PREDICTED: reticulon-like protein B21 isoform X1 [Elaeis guineensis]
Swissprottr|Q56X72|RTNLS_ARATH7.00E-81Reticulon-like protein B21
trEMBLtr|M0SKZ2|M0SKZ2_MUSAM2.00E-101Reticulon-like protein {ECO:0000256|RuleBase:RU210713}
TAIRAT5G58000_17.00E-72Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001363038666315234+
Transcript Sequence

Network for GWHGAAEX001541

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02453.16Reticulon2443682.00E-18
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms18.750
SRR2545915Juvenile tuber32.570
SRP108465SRR5643513five period of Gastrodia elata46.900
SRR5643514five period of Gastrodia elata51.180
SRR5643515five period of Gastrodia elata38.490
SRR5643524five period of Gastrodia elata47.960
SRR5643525five period of Gastrodia elata18.800
SRR5643528five period of Gastrodia elata14.630
SRR5643658five period of Gastrodia elata16.980
SRR5643659five period of Gastrodia elata20.130
SRR5643660five period of Gastrodia elata17.850
SRR5643661five period of Gastrodia elata20.440
SRR5643662five period of Gastrodia elata15.410
SRR5643663five period of Gastrodia elata15.330
SRR5643664five period of Gastrodia elata13.870
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_128.200
SRR6049655Rhizomagastrodiae_C368-T10_good_144.130
SRR6049656Rhizomagastrodiae_C368-T07_good_137.150
SRR6049657Rhizomagastrodiae_C368-T07_good_127.880
SRR6049658Rhizomagastrodiae_C368-T04_good_118.700
SRR6049659Rhizomagastrodiae_C368-T04_good_118.610
SRR6049660Rhizomagastrodiae_C368-T01_good_126.990
SRR6049661Rhizomagastrodiae_C368-T04_good_123.840
SRR6049662Rhizomagastrodiae_C368-T01_good_135.060
SRR6049663Rhizomagastrodiae_C368-T01_good_127.570
SRR6049664Rhizomagastrodiae_C368-T10_good_133.990
SRR6049665Rhizomagastrodiae_C368-T10_good_133.990
SRP279888GastroGastrodia elata tuber 14.82
JuvenJuvenile tuber37.54
Mother_GastroMother tuber of Gastrodia elata 28.87
Mother_JuvenMother tuber of Juvenile 29.19