Detail information of GWHGAAEX001547/evm.TU.scaffold_11.147


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|186683200|ref|YP_001866396.1|3.00E-24signal transduction protein [Nostoc punctiforme PCC 73102]
KOGKOG00281.00E-84Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein
nrgi|672118047|ref|XP_008782222.1|1.12E-90PREDICTED: caltractin-like [Phoenix dactylifera]
Swissprottr|P41210|CATR_ATRNU2.00E-90Caltractin
trEMBLtr|A0A061DGX6|A0A061DGX6_THECC5.00E-89Centrin2 isoform 1 {ECO:0000313|EMBL:EOX91402.1}
TAIRAT3G503601.00E-84centrin2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001365569646588795-
Transcript Sequence

Network for GWHGAAEX001547

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13499.5EF-hand_734961.60E-15
PF13499.5EF-hand_71061706.80E-13
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13448CML Plant-pathogen interaction map04626

Gene Ontology

GO term OntologyName
GO:0005509Molecular Functioncalcium ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms162.510
SRR2545915Juvenile tuber228.210
SRP108465SRR5643513five period of Gastrodia elata104.900
SRR5643514five period of Gastrodia elata133.040
SRR5643515five period of Gastrodia elata109.960
SRR5643524five period of Gastrodia elata130.840
SRR5643525five period of Gastrodia elata106.100
SRR5643528five period of Gastrodia elata113.420
SRR5643658five period of Gastrodia elata121.650
SRR5643659five period of Gastrodia elata88.600
SRR5643660five period of Gastrodia elata85.690
SRR5643661five period of Gastrodia elata88.380
SRR5643662five period of Gastrodia elata82.830
SRR5643663five period of Gastrodia elata93.550
SRR5643664five period of Gastrodia elata79.410
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_192.200
SRR6049655Rhizomagastrodiae_C368-T10_good_199.180
SRR6049656Rhizomagastrodiae_C368-T07_good_194.870
SRR6049657Rhizomagastrodiae_C368-T07_good_191.550
SRR6049658Rhizomagastrodiae_C368-T04_good_185.150
SRR6049659Rhizomagastrodiae_C368-T04_good_189.110
SRR6049660Rhizomagastrodiae_C368-T01_good_182.180
SRR6049661Rhizomagastrodiae_C368-T04_good_182.300
SRR6049662Rhizomagastrodiae_C368-T01_good_194.670
SRR6049663Rhizomagastrodiae_C368-T01_good_189.850
SRR6049664Rhizomagastrodiae_C368-T10_good_1116.980
SRR6049665Rhizomagastrodiae_C368-T10_good_1116.980
SRP279888GastroGastrodia elata tuber 143.55
JuvenJuvenile tuber158.11
Mother_GastroMother tuber of Gastrodia elata 129.53
Mother_JuvenMother tuber of Juvenile 160.70