Detail information of GWHGAAEX001549/evm.TU.scaffold_11.149


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743814493|ref|XP_010930051.1|9.12E-134PREDICTED: uncharacterized protein LOC105051359 isoform X2 [Elaeis guineensis]
trEMBLtr|A3BQY8|A3BQY8_ORYSJ2.00E-117Putative uncharacterized protein {ECO:0000313|EMBL:EAZ41977.1}
TAIRAT1G676608.00E-108Restriction endonuclease, type II-like superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001366006076601449+
Transcript Sequence

Network for GWHGAAEX001549

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF09588.9YqaJ461836.00E-19
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms17.590
SRR2545915Juvenile tuber12.810
SRP108465SRR5643513five period of Gastrodia elata45.360
SRR5643514five period of Gastrodia elata36.270
SRR5643515five period of Gastrodia elata43.710
SRR5643524five period of Gastrodia elata38.360
SRR5643525five period of Gastrodia elata78.250
SRR5643528five period of Gastrodia elata52.090
SRR5643658five period of Gastrodia elata64.390
SRR5643659five period of Gastrodia elata27.920
SRR5643660five period of Gastrodia elata38.180
SRR5643661five period of Gastrodia elata34.990
SRR5643662five period of Gastrodia elata38.370
SRR5643663five period of Gastrodia elata36.110
SRR5643664five period of Gastrodia elata44.030
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_131.550
SRR6049655Rhizomagastrodiae_C368-T10_good_113.800
SRR6049656Rhizomagastrodiae_C368-T07_good_131.240
SRR6049657Rhizomagastrodiae_C368-T07_good_132.620
SRR6049658Rhizomagastrodiae_C368-T04_good_123.220
SRR6049659Rhizomagastrodiae_C368-T04_good_120.140
SRR6049660Rhizomagastrodiae_C368-T01_good_129.370
SRR6049661Rhizomagastrodiae_C368-T04_good_117.410
SRR6049662Rhizomagastrodiae_C368-T01_good_129.010
SRR6049663Rhizomagastrodiae_C368-T01_good_125.660
SRR6049664Rhizomagastrodiae_C368-T10_good_139.260
SRR6049665Rhizomagastrodiae_C368-T10_good_139.260
SRP279888GastroGastrodia elata tuber 30.88
JuvenJuvenile tuber33.21
Mother_GastroMother tuber of Gastrodia elata 71.36
Mother_JuvenMother tuber of Juvenile 40.96