Detail information of GWHGAAEX001571/evm.TU.scaffold_11.192
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|430762876|ref|YP_007218733.1| | 9.00E-67 | Adenylate kinase [Thioalkalivibrio nitratireducens DSM 14787] |
| KOG | KOG3078 | 7.00E-145 | Adenylate kinase |
| nr | gi|743814716|ref|XP_010930130.1| | 5.60E-159 | PREDICTED: adenylate kinase 4 [Elaeis guineensis] |
| Swissprot | tr|Q08480|KAD4_ORYSJ | 1.00E-157 | Adenylate kinase 4 |
| trEMBL | tr|A0A059CYB6|A0A059CYB6_EUCGR | 5.00E-157 | Uncharacterized protein {ECO:0000313|EMBL:KCW83181.1} |
| TAIR | AT5G63400 | 7.00E-145 | adenylate kinase 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000013 | 9737957 | 9767697 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX001571
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00406.21 | ADK | 98 | 282 | 1.40E-58 |
| PF05191.13 | ADK_lid | 219 | 254 | 5.30E-15 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00939 | adk, AK | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| Biosynthesis of antibiotics | map01130 | ||
| Purine metabolism | map00230 | ||
| Thiamine metabolism | map00730 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006139 | Biological Process | nucleobase-containing compound metabolic process |
| GO:0004017 | Molecular Function | adenylate kinase activity |
| GO:0016776 | Molecular Function | phosphotransferase activity, phosphate group as acceptor |
| GO:0019205 | Molecular Function | nucleobase-containing compound kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 35.400 |
| SRR2545915 | Juvenile tuber | 36.490 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 52.360 |
| SRR5643514 | five period of Gastrodia elata | 68.850 | |
| SRR5643515 | five period of Gastrodia elata | 58.840 | |
| SRR5643524 | five period of Gastrodia elata | 77.300 | |
| SRR5643525 | five period of Gastrodia elata | 96.140 | |
| SRR5643528 | five period of Gastrodia elata | 141.000 | |
| SRR5643658 | five period of Gastrodia elata | 129.360 | |
| SRR5643659 | five period of Gastrodia elata | 36.510 | |
| SRR5643660 | five period of Gastrodia elata | 35.840 | |
| SRR5643661 | five period of Gastrodia elata | 35.030 | |
| SRR5643662 | five period of Gastrodia elata | 30.590 | |
| SRR5643663 | five period of Gastrodia elata | 33.900 | |
| SRR5643664 | five period of Gastrodia elata | 28.290 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 49.400 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 76.140 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 55.260 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 48.250 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 52.950 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 49.730 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 47.520 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 49.680 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 74.300 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 66.260 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 86.200 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 86.200 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 33.31 |
| Juven | Juvenile tuber | 31.98 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 54.84 | |
| Mother_Juven | Mother tuber of Juvenile | 50.26 |